Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0575 ATGTCTGACTCACTCCTAACTTTCCATTCTCTTTCAACCATTCTTGCTCTTCTCCCAATCTTCATCTTCATTCTCATCAAAAGAAAGCAAAGCAAACCCAGGCTCAACCTTCCCCCAGGTAACATGGGTTGGCCATTTCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCCACCACAATAGGGGAATTCATGGAGCAACACATAGCGAGGTATGGAACAATTTACAAGTCGAAACTGTTTGGGGAGCCAGCAATAGTGTCAGCAGATGCAGGACTCAACAGGTTCATTCTACAGAACGAAGGGAAATTGTTCGAGTGCAGCTATCCCAGAAGCATTGGTGGAATACTAGGAAAATGGTCCATGTTGGTCTTAGTTGGTGACATGCATAGAGACATGCGGGTTATATCGCTAAACTTTCTAAGCCACGCCAGGCTCAGAACACACCTCTTGAAAGAGGTGGAGAAGCAATCCCTCTTGGTTCTAAACACTTGGAACCAAAATTCCACATTCTCAGCCCAAGATGAAGCAAAGAAGTTCACCTTCAATTTGATGGCCAAGCATATCATGAGCATGGATCCAGGGGATATAGAGACAGAGCATCTAAAGAAGGAGTACGTCACTTTCATGAAAGGGGTGGTATCCGCGCCATTAAATTTACCTGGAACTGCATACCGAAAGGCATTGAAGTCTAGGTCCATTATACTAAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTTAGAAGAATCCAAGAGGGGAATGAGAGTTTGGAGGAAGATGATCTTCTAAATTGGGTTTTGAAGAATTCAAATCTTTCAACCGAGCAAATTCTTGACTTGATTCTCAGCTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTACTTCTTACCCGGTTGTCCTCAAGCTATACAACAGTTAAAGGAAGAACACAGAGAAATTGCCAGAGCCAAAAAGCAAGCAGGGGAAGTTGAACTCACTTGGGATGACTACAAACGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTTAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTGTGAAAGATGTTAACTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTCCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGCAGTCATGGAAGTTGTCCAAGCAAGAACACAGCAAACAACAACTTTCTTCCGTTCGGAGGAGGACCACGATTATGTGCAGGATCAGAGTTAGCTAAGCTTGAAATGGCTGTTTTCATTCACCATCTCATTCTCAACTACCATTGGGAATTGGCTGATACCGATCAAGCTTTTGCCTACCCTTTTGTCGACTTCCCCAAAGGCCTACCCGTTAGAGTCCAAGCCCACTCTTTACTTTGA 1470 0.4415 MSDSLLTFHSLSTILALLPIFIFILIKRKQSKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKQSLLVLNTWNQNSTFSAQDEAKKFTFNLMAKHIMSMDPGDIETEHLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSIILKFIEGKMEERVRRIQEGNESLEEDDLLNWVLKNSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAIQQLKEEHREIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAVKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSHGSCPSKNTANNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDQAFAYPFVDFPKGLPVRVQAHSLL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0575 489 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PANTHER CYTOCHROME P450 26 19 463 - -
Gso11g0575 489 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 Pfam Cytochrome P450 38 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 Coils Coil 241 261 - -
Gso11g0575 489 PANTHER CYTOCHROME P450 90B1 19 463 - -
Gso11g0575 489 Coils Coil 307 334 - -
Gso11g0575 489 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0575 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Gso11g0575 489 SUPERFAMILY Cytochrome P450 32 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0575 Gso-Chr11 5126698 5131648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0575 27 408 Cytochrome P450 AT3G50660 75.682 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0575 K09587 - gmx:100789515 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0575 11 5126698 5131648 Gso11g0575 11 5126698 5131648 ECH
Gso11g0575 11 5126698 5131648 Gso2g0481 2 5053546 5059610 PCT
Gso2g0481 2 5053546 5059610 Gso11g0575 11 5126698 5131648 PCT