Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0568 ATGGGGGAAAAAACTATTGACTCTACTTCTAAACATCGGGAACAACATGGAGAGGCAAAAGATGTTGTTAGAAGAACCTTGAAGACCAAGATTAAACAATTAACTAATCAAATCCTTGTTGAGAGAGGGCAATCAGTCAAAGAAAAAATTCAAAGACATTGGGAGCATCTTGAGCTTTTGTTTTCAATAGTCATGTCAATAATATTTGAAAGGGGGTCTTTGGAAACCGAGAAAAATGTCAATATGCTTTCTTCAAGAATTCACAATCCTTTATGTAAATTAAGTGGCTTTCCTAAAGGTATTGTGGAGAAGAATCAAATCAACAATGTTGACTTATCACCAACAAAAAGCATTAGGATTCCACACACGGATAAATTACCACAATATACATCTTGGGTATACGTGGCTAGAAATGAGAGAATGGTCGATGATCAATCGGTTATCGGGAAATACCAAATGTACCATGATAAAAATAAAGGTGAAATGGTGATATGCAGTGACAATGAGGAAGAGATAGTAGATCCCGAGGATGTCAAACATGAATTCACTGAGGTTGAAGACAAATTTTTGCGGATGACGCTTGAAGAATATGGGTGTACTGAGGAGGTATTGAATGTCGTTAAAAAATTTGTTAAGACTACTAATTCAGAAATTCAGGAGAGGTATGAAAAACTCAAGGAAAAGAATATGGAGATTCTAGACCAACATTGTGAAGATTGTCATTGTAGAGGATGTGAAAATCATCTTGGATTATGTTTGGAAAAAAGCTTGAGTGTTACTTTAGAAACTTTCAATAATCTTTTATGTCGACAATGTCTGATCTTTGATTGTCCTATGCATGGCATTAATAAACCTTTAGTATACCATAGTGAAAACCAACCAGTTTGGCTTGAACCTGAAGGTGATAAGAAACCATGCAGTGATCAATGTTACCTCATGTTAAAGGATGCTAGGATTTTGTCGAAAAATTCAACTCAATGGTCTTTTCAAGATAAAGTAATTACAACAATGGAAGAGGACTCAATATTGCCTCGTGATGATGAAGAAAACCACACAGTGTATTATGCATCTTTGAAAAGTCTTGTTGAACATACTTCAGAAAAACTAACAATTTCTGGTAGCTCTGGCCATGGCGAGTGTGACAAAAGAGTTGTGGATGGACAAAAAGATCTCATAAATGGGATAAAACTTAACCAAATATCCATTTCAAGGGAAGTGCAAGCTAATGGGATGTCAAGCGACTCATATTGGAGACCTCTGGAAATGGATTTGTATTTGAAGGGAGTAAAAATGTTTGGAAAAAATAGTTGCCTTATAGCCATTACCTTACTTCCTGGCTTGAAGACATGCTTGGAAGTAGCTAGGTACATGTTTGGTGGTGGGGAGTTAATGACCAATGGATTCATACCAAGTTCAATCATGGAAAAAAATGAAAAGATCAATGCAGGGTGCACAGACCAAGAAATGTCATCAAGATCACGACCGCAACGAAAAAAAGGAAAACCTAAAAAGTTCAATTATTCTCGAAAGTCTGCTGGCCTCCCACCTAGATGGCGAAAAATTGCTTATGGGCAAAACTTGTGTAATAAGCAATATACTCCTTGTGGGTGCCATGGAATATGTGGAAAGGAATGTTCCTGTCTTGTTAATGGAACTTGCTGTGAAAAATATTGCGGGTGTTCAAAACACTGCAGTAATCGATTTAGAGGATGCCGTTGCACAAAAAGTCAATGCAAAAGTCGATCATGTCCATGTTTTGCAGCCAACCGTGAATGTGACCCAGATGTTTGTCAAAATTGTTGGGTTAGTTGCGGTGATGACTCATTGGGGAGGCTACCTCGACATGAAGATGCTAAGTGTGGAAATATGAATCTTCTTTTAGGGCAAAAAGAAAGGATTCTTTTGGCAAAGTCAGATGTTATAGGATGGGGAGCCTTTGCAAAGAACCCAATTAGCAAAAATGTTTGCCTAGGAGAGTACACGGGTGAGCTAATCCCTCCTAAAGAAGCAGAAAAGCGTGGGAAACTATATGATCGCATAAACACTTCCTTCCTTTTTAACCTCAATGACCAGTGGGTTATTGACGCTTTTCGCATGGGAGACAAGTTAAAATTTGCAAACCATTCATCAAAGCCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGATCATCGAGTCGGCATATTTGCCAGGGAAAACATTAAAGCTGGTGATGAGATTTTTTATGACTATGGCTATGATCTAGATTCTGCACCGCTATGGGCTCTTCCACCCAACGAGGCGGCCAAGAAAGACAAATTAGTTGTTTCTCTGAGTAGGACAAAGAAAAAAGAAAAAAAATCAGTTTCATTTCAATAA 2361 0.3799 MGEKTIDSTSKHREQHGEAKDVVRRTLKTKIKQLTNQILVERGQSVKEKIQRHWEHLELLFSIVMSIIFERGSLETEKNVNMLSSRIHNPLCKLSGFPKGIVEKNQINNVDLSPTKSIRIPHTDKLPQYTSWVYVARNERMVDDQSVIGKYQMYHDKNKGEMVICSDNEEEIVDPEDVKHEFTEVEDKFLRMTLEEYGCTEEVLNVVKKFVKTTNSEIQERYEKLKEKNMEILDQHCEDCHCRGCENHLGLCLEKSLSVTLETFNNLLCRQCLIFDCPMHGINKPLVYHSENQPVWLEPEGDKKPCSDQCYLMLKDARILSKNSTQWSFQDKVITTMEEDSILPRDDEENHTVYYASLKSLVEHTSEKLTISGSSGHGECDKRVVDGQKDLINGIKLNQISISREVQANGMSSDSYWRPLEMDLYLKGVKMFGKNSCLIAITLLPGLKTCLEVARYMFGGGELMTNGFIPSSIMEKNEKINAGCTDQEMSSRSRPQRKKGKPKKFNYSRKSAGLPPRWRKIAYGQNLCNKQYTPCGCHGICGKECSCLVNGTCCEKYCGCSKHCSNRFRGCRCTKSQCKSRSCPCFAANRECDPDVCQNCWVSCGDDSLGRLPRHEDAKCGNMNLLLGQKERILLAKSDVIGWGAFAKNPISKNVCLGEYTGELIPPKEAEKRGKLYDRINTSFLFNLNDQWVIDAFRMGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFARENIKAGDEIFYDYGYDLDSAPLWALPPNEAAKKDKLVVSLSRTKKKEKKSVSFQ* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0568 786 SMART CXC_2 566 603 IPR033467 -
Gso11g0568 786 SMART set_7 631 752 IPR001214 GO:0005515
Gso11g0568 786 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 17 778 - -
Gso11g0568 786 CDD SET_EZH 631 747 - -
Gso11g0568 786 Pfam SET domain 642 746 IPR001214 GO:0005515
Gso11g0568 786 Gene3D SET domain 532 748 IPR046341 -
Gso11g0568 786 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 7 786 IPR025778 GO:0031519
Gso11g0568 786 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 17 778 IPR045318 GO:0006338|GO:0018024
Gso11g0568 786 MobiDBLite consensus disorder prediction 1 21 - -
Gso11g0568 786 ProSiteProfiles CXC domain profile. 518 617 IPR026489 -
Gso11g0568 786 MobiDBLite consensus disorder prediction 483 511 - -
Gso11g0568 786 Pfam CXC domain 570 601 IPR041355 -
Gso11g0568 786 SUPERFAMILY SET domain 528 750 IPR046341 -
Gso11g0568 786 Coils Coil 208 235 - -
Gso11g0568 786 ProSiteProfiles SET domain profile. 631 746 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0568 Gso-Chr11 5062856 5070897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0568 620 746 C2H2 Transcription Factor Family AT2G23740 29.861 2.10e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso11g0568 SET 1.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0568 - - gmx:100788459 1638.62