Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0538 ATGTACAAAAAGTGGCGCATAATTGCATTCATTAACAATCCCTTTTGTTACACCCTTCCTCTGCAAACAACAATGCATCTCTTTCCCTTCATCCCCATAATCATTTTCACACTATTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCGTGTCCAAGAAGGGGTAACAAAAATTCTATCCGAGGTTACACTTGCAATGGTGCAAACCATAGCTGCCAAAGTTACCTCACCTTCAGATCTCAACCCATTTACAACTCTGTCAAGACAATATCAACTTTGTTGGGTTCTGACCCATCCCAGCTTGCTAAAATAAACTCAGTTTCCATGAATGACACCTTTGAGACAAACAAGTTGGTGATTGTTCCGGTCAACTGTTCCTGTTCAGGTGAGTATTATCAAACAAACACATCCTATGTGTTCCAGAATTCAGAAACTTACTTGTTGATTGCTAACAACACTTTTGAGGGCCTCACAACATGTCAAGCTTTGGAGAACCAAAACCACAACCCTGCAAACATATACCCCGGTAGAAGACTTTTAGTGCCTCTCAGATGTGCTTGTCCCACAAAGAACCAAACCAAGAAAGGCATCAGGTACCTCTTGAGTTACTTGGTGAACTGGGGTGATTCTGTTTCATTCATTAGTGAGAAATTTGGTGTCAACTTTATGTCTACTCTTGAAGCTAATACCCTTACTCTCACACAAGCCATGATCTATCCCTTTACGACAATTTTAGTTCCCCTTCATGACAAGCCCTCAAGTTCTCAAACCGTTTCGCCAACTCAACGCATTAGTCCACCACCCTCACCTCCCTCTTCTGATCATAGCTCAAACAAAACATGGGTGTATGTAGTTGTTGGAGTTGTTGTGGGAGCTATTGCCTTAACATCGGTTCTCTGTGCTGTCATTTTCTTCAAACGCTATCGCAAAAATAGAAACAAAGATGACTCATTGGTGGCAGTGCCTAAGAGTTTTGAGGCAATTGAGGAAAAACCTCAAGTGAAAGTGAATGAAAAATTGTCAGAGAACATATCTGGCATAGCTCAGTCTTTCAAAGTGTATAACTTTGAGGAACTACAGCGTGCAACAGATAACTTTAGTCCTAGCAGCTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCTGCAATTAAAAAGATAGAAGGAGATGTGTCAAAAGAGATAGAGATACTGAACAAAATCAACCATACCAACGTTATACGCCTTTCTGGAGTTAGCTTCCATGAGGGGCGTTGGTACCTTGTTTATGTGTATGCTACTAATGGGGACTTGAGTGAATGGATCTACTTCAACAACGTGGACGGGAAGTTTCTGAGTTGGACTCAAAGAATGCAAATTGCATTGGATGTGGCAACAGGACTTGACTATCTTCACAGTTTCACTTCTCCTCCTCACATCCACAAGGATATTAACAGCAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTCGCGAATTTAAGCCTTGCTAGGTGTTTGGAAGGAGGGGATGATCAATTTCCCACGACGAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCCACAAAGCTTGACGTATATGCATTTGGGGTACTGATGCTGGAAATGGTCACTGGAAAAGAGGTCGCTGCTATTTTAACTGAAGATGAGACAAAATTGTCACATGTTTTAAGTGGCATACCTGGTGAGAGAAGTGGCAAGGAGTGGTTGAAGGAGTTTGTGGATCCCTCTTTGGGAGAGAATTGTTCATTGGAACTTGCTATGTTTGTGATTGAAATGATTGATGATTGCATAAAGACAGATCCAGCAAGTCGCCCTAGTGTGCATGAGATTGTGCAATCTCTTTCAAGAACAGTGAACTCTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAATTAA 1977 0.4203 MYKKWRIIAFINNPFCYTLPLQTTMHLFPFIPIIIFTLLIHNFSLILGQQPYIGLGTVACPRRGNKNSIRGYTCNGANHSCQSYLTFRSQPIYNSVKTISTLLGSDPSQLAKINSVSMNDTFETNKLVIVPVNCSCSGEYYQTNTSYVFQNSETYLLIANNTFEGLTTCQALENQNHNPANIYPGRRLLVPLRCACPTKNQTKKGIRYLLSYLVNWGDSVSFISEKFGVNFMSTLEANTLTLTQAMIYPFTTILVPLHDKPSSSQTVSPTQRISPPPSPPSSDHSSNKTWVYVVVGVVVGAIALTSVLCAVIFFKRYRKNRNKDDSLVAVPKSFEAIEEKPQVKVNEKLSENISGIAQSFKVYNFEELQRATDNFSPSSWIKGSVYRGVINGDLAAIKKIEGDVSKEIEILNKINHTNVIRLSGVSFHEGRWYLVYVYATNGDLSEWIYFNNVDGKFLSWTQRMQIALDVATGLDYLHSFTSPPHIHKDINSSNILLDGDFRGKVANLSLARCLEGGDDQFPTTRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMVTGKEVAAILTEDETKLSHVLSGIPGERSGKEWLKEFVDPSLGENCSLELAMFVIEMIDDCIKTDPASRPSVHEIVQSLSRTVNSSLSWERSMNVPRN* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0538 658 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 33 654 - -
Gso11g0538 658 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 33 654 - -
Gso11g0538 658 SUPERFAMILY Protein kinase-like (PK-like) 357 639 IPR011009 -
Gso11g0538 658 Gene3D Phosphorylase Kinase; domain 1 344 438 - -
Gso11g0538 658 Pfam LysM domain 212 256 IPR018392 -
Gso11g0538 658 Gene3D Transferase(Phosphotransferase) domain 1 440 654 - -
Gso11g0538 658 ProSiteProfiles Protein kinase domain profile. 343 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0538 658 Pfam Protein kinase domain 384 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0538 658 MobiDBLite consensus disorder prediction 261 285 - -
Gso11g0538 658 ProSiteProfiles LysM domain profile. 210 255 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0538 Gso-Chr11 4829633 4831887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0538 24 652 Receptor kinase-like Gene Family AT2G23770 44.150 2.79e-169 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso11g0538 Pkinase 2.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0538 - - gmx:100779907 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0538 11 4829633 4831887 Gso11g0538 11 4829633 4831887 ECH
Gso1g1537 1 52039119 52041563 Gso11g0538 11 4829633 4831887 GST