Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0537 ATGGCTGTCTTCTTTCCCTTTCTTCCTCTCCACTCTCAGATTCTTTGTCTTGTGATCATGTTGTTTTCCACTAATATTGTAGCTCAATCACAACAGGACAATAGAACAAACTTTTCATGCCCTTCTGATTCACCGCCTTCATGTGAAACCTATGTAACATACATTGCTCAGTCTCCAAATTTTTTGAGTCTAACCAACATATCCAATATATTTGACACAAGCCCTTTATCCATTGCAAGAGCCAGTAACTTAGAGCCTATGGATGACAAGCTAGTCAAAGACCAAGTCTTACTCGTACCAGTAACCTGTGGTTGCACTGGAAACCGCTCTTTTGCCAATATCTCCTATGAGATCAACCAAGGTGATAGCTTCTACTTTGTTGCAACCACTTCATACGAGAATCTCACGAATTGGCGTGCAGTGATGGATTTAAACCCCGTTCTAAGTCCAAATAAGTTGCCAATAGGAATCCAAGTAGTATTTCCTTTATTCTGCAAGTGCCCTTCAAAGAACCAGTTGGACAAAGAGATAAAGTACCTGATTACATACGTGTGGAAGCCCGGTGACAATGTTTCCCTTGTAAGTGACAAGTTTGGTGCATCACCAGAGGACATAATGAGTGAAAACAACTATGGTCAGAACTTTACTGCTGCAAACAACCTTCCAGTTCTGATCCCAGTGACACGCTTGCCAGTTCTTGCTCGATCTCCTTCGGACGGAAGAAAAGGCGGAATTCGTCTTCCGGTTATAATTGGTATTAGCTTGGGATGCACGCTACTGGTTCTGGTTTTAGCAGTGTTACTGGTGTATGTATATTGTCTGAAAATGAAGACTTTGAATAGGAGTGCTTCATCGGCTGAAACTGCAGATAAACTACTTTCTGGAGTTTCAGGCTATGTAAGTAAGCCTACCATGTATGAAACTGATGCGATCATGGAAGCTACAATGAACCTCAGTGAGCAGTGCAAGATTGGGGAATCAGTGTACAAGGCAAACATAGAGGGTAAGGTTTTGGCAGTAAAAAGATTCAAGGAAGATGTCACGGAAGAGCTGAAAATTCTGCAGAAGGTGAATCATGGGAATCTGGTGAAACTAATGGGTGTCTCATCAGACAATGATGGAAACTGTTTTGTGGTTTATGAATACGCTGAAAATGGGTCTCTTGATGAGTGGCTATTCTCCAAGTCTTGTTCAGACACATCAAACTCAAGGGCATCCCTTACATGGTGTCAGAGGATAAGCATGGCAGTGGATGTTGCGATGGGTTTGCAGTACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACAAGCAGTAATATCCTTCTTGACTCGAACTTTAAGGCCAAGATAGCAAATTTCTCCATGGCCAGAACTTTTACCAACCCCATGATGCCAAAGATAGATGTCTTTGCATTTGGGGTGGTTCTGATTGAGTTGCTTACCGGAAGGAAAGCCATGACAACCAAGGAAAATGGTGAGGTGGTCATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGAGGCTCAAAAAATGGATGGATCCTAAGTTAGAGAGTTATTATCCTATAGATTACGCTCTCAGCTTGGCCTCCTTGGCGGTGAATTGTACTGCAGATAAGTCTTTGTCCAGACCAACCATTGCAGAAATTGTCCTTAGCCTCTCCCTTCTCACTCAACCATCTCCCGCAACATTGGAGAGATCCTTGACTTCTTCTGGATTGGATGTAGAAGCTACTCAAATTGTCACTTCCATAGCAGCTCGTTGA 1797 0.4268 MAVFFPFLPLHSQILCLVIMLFSTNIVAQSQQDNRTNFSCPSDSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPLSIARASNLEPMDDKLVKDQVLLVPVTCGCTGNRSFANISYEINQGDSFYFVATTSYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDKEIKYLITYVWKPGDNVSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPVTRLPVLARSPSDGRKGGIRLPVIIGISLGCTLLVLVLAVLLVYVYCLKMKTLNRSASSAETADKLLSGVSGYVSKPTMYETDAIMEATMNLSEQCKIGESVYKANIEGKVLAVKRFKEDVTEELKILQKVNHGNLVKLMGVSSDNDGNCFVVYEYAENGSLDEWLFSKSCSDTSNSRASLTWCQRISMAVDVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMPKIDVFAFGVVLIELLTGRKAMTTKENGEVVMLWKDIWKIFDQEENREERLKKWMDPKLESYYPIDYALSLASLAVNCTADKSLSRPTIAEIVLSLSLLTQPSPATLERSLTSSGLDVEATQIVTSIAAR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0537 598 ProSiteProfiles Protein kinase domain profile. 286 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0537 598 Gene3D Phosphorylase Kinase; domain 1 294 382 - -
Gso11g0537 598 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 20 598 - -
Gso11g0537 598 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 20 598 - -
Gso11g0537 598 ProSitePatterns Tyrosine protein kinases specific active-site signature. 434 446 IPR008266 GO:0004672|GO:0006468
Gso11g0537 598 Gene3D Transferase(Phosphotransferase) domain 1 467 580 - -
Gso11g0537 598 SUPERFAMILY Protein kinase-like (PK-like) 305 564 IPR011009 -
Gso11g0537 598 Pfam Protein tyrosine and serine/threonine kinase 343 464 IPR001245 GO:0004672|GO:0006468
Gso11g0537 598 Gene3D Transferase(Phosphotransferase) domain 1 383 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0537 Gso-Chr11 4825044 4827193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0537 89 567 Receptor kinase-like Gene Family AT3G21630 30.467 4.27e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso11g0537 PK_Tyr_Ser-Thr 2.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0537 - - gmx:100301877 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0537 11 4825044 4827193 Gso11g0537 11 4825044 4827193 ECH
Gso1g1538 1 52043453 52046173 Gso11g0537 11 4825044 4827193 GST