Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0534 ATGGAAGCTCAAACCTGGTTCTTGGTTATTGCCTTATTCCTCTTCCTTCTACTGAATCGGCTTGCAAAATATCTCAAGCCAAAACCTAATGCTGGTCACAAACTTCCCCCTGGTCCAAAAAAGCTACCTCTCGTAGGAAACATGCATCAACTAGCAGCAGCAGGTCCACTCCCACATCGTGCACTCCGAGAACTTGCTCATAAATATGGACCTCTGATGCACCTCCAACTTGGTGAGATTTCTGCAGTGGTAGTATCCTCCCCCAACATGGCCAAGGAAATAACCAAAACCCATGATGTTGCTTTTGTGCAGAGACCACAAATCATTTCTGCACAAATCTTGTCCTACGGGGGATTAGATGTTGTTTTCGCTCCATACGGTGATTACTGGAGACAAATGAGGAAGGTGTTCGTGTCAGAACTTCTAAGTGCCAAGAGGGTTCAGTCTTTCTCTTTTATTAGAGAAGACGAGGCAGCAAAACTTATAGACTCAATTCGAGCATCAGAAGGTTCACCAATCAATCTCACTAGAAAAATTTTCTCATTGGTGAGTGCTTCTGTTTCCAGGGCAGCAATTGGTAACAAATCTAAGGACCAGGATGAGTTTATGTATTGGGTTCAGAAAGTGATAGGATCTGTGGGAGGATTCGAACTTGCTGATTTGTTTCCTTCAATGAAGTTCATACATTTCATAACTGGGACGAAGGCCAAATTGGAGAAGCTGCTCAATAGGGTTGACAGGGTGCTGGAAAACATTGTCAGAGAGCATCTAGAAAGGCAAATAAGAGCAAAAGAAGGAAGAATTTTAGTTGATGAGGACGAAGATCTTGTTGATGTTCTTATCAGAGTCCAACAAGCTGACACTCTCGACATCAAAATGACCACTAGGCACGTCAAAGCTTTGATATTGGATGTATTTGCTGGTGGAATTGATACTTCAGCATCAACATTAGAGTGGGCAATGACAGAAATGATGAAAAATCCAAGAGTGAGGGAGAAAGCACAAGCCGAGTTAAGACAAGCATTTAGAGAGAAGAAAATAATTCATGAAAGTGATATAGAGCAGCTTACTTATTTGAAGTTGGTGATCAAAGAGACATTAAGGCTACACCCACCTACTCCTTTATTGATCCCTAGAGAATGCTCTGAAGAAACCATCATTGCTGGGTATGAAATACCTGTCAAAACTAAAGTGATGATAAATGTATGGGCAATTTGTAGGGATCCCAAATATTGGACTGATGCAGAGAGGTTTGTCCCAGAAAGGTTCGAGGATAGTTCTATTGATTTCAAAGGGAATAACTTTGAGTACCTACCATTTGGGGCAGGAAGAAGAATATGTCCAGGCATCTCATTTGGTTTAGCAAGTATTATGCTTCCATTGGCTCAATTACTTTTGTATTTCAACTGGGAGCTCCCAAATGGGATGAAACCTGAGAGTATAGATATGACTGAACGCTTCGGATTGGCTATTGGGAGGAAAAATGATTTGTGTTTGATTCCCTTTATTTATGATCCTTGA 1521 0.4129 MEAQTWFLVIALFLFLLLNRLAKYLKPKPNAGHKLPPGPKKLPLVGNMHQLAAAGPLPHRALRELAHKYGPLMHLQLGEISAVVVSSPNMAKEITKTHDVAFVQRPQIISAQILSYGGLDVVFAPYGDYWRQMRKVFVSELLSAKRVQSFSFIREDEAAKLIDSIRASEGSPINLTRKIFSLVSASVSRAAIGNKSKDQDEFMYWVQKVIGSVGGFELADLFPSMKFIHFITGTKAKLEKLLNRVDRVLENIVREHLERQIRAKEGRILVDEDEDLVDVLIRVQQADTLDIKMTTRHVKALILDVFAGGIDTSASTLEWAMTEMMKNPRVREKAQAELRQAFREKKIIHESDIEQLTYLKLVIKETLRLHPPTPLLIPRECSEETIIAGYEIPVKTKVMINVWAICRDPKYWTDAERFVPERFEDSSIDFKGNNFEYLPFGAGRRICPGISFGLASIMLPLAQLLLYFNWELPNGMKPESIDMTERFGLAIGRKNDLCLIPFIYDP* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0534 506 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gso11g0534 506 PANTHER OS08G0105600 PROTEIN 3 505 - -
Gso11g0534 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 PANTHER CYTOCHROME P450 71D8 3 505 - -
Gso11g0534 506 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0534 506 Coils Coil 231 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0534 Gso-Chr11 4795283 4798318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0534 21 504 Cytochrome P450 AT3G26320 43.205 1.94e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0534 - K15472 gmx:100785715 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1540 1 52061836 52064315 Gso11g0534 11 4795283 4798318 GST