Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0533 ATGGAATATTCTCCATTGTCCATTGTTATTACCTTCTTTGTGTTCTTGCTCTTGCATTGGCTAGTTAAAACTTACAAGCAAAAATCGAGTCACAAGTTGCCCCCTGGCCCATGGAGGTTACCCATCATTGGTAACCTCCATCAGCTAGCATTAGCAGCTTCACTTCCTGATCAAGCTCTCCAAAAACTTGTCCGCAAATATGGACCTCTCATGCACCTCCAACTAGGTGAAATTTCAACACTTGTTGTGTCCTCCCCCAAGATGGCTATGGAGATGATGAAAACCCATGATGTTCATTTTGTGCAGAGGCCCCAACTTCTGGCTCCACAATTTATGGTCTATGGGGCAACAGATATTGCTTTTGCTCCATACGGTGATTATTGGAGGCAAATCAGGAAAATATGTACCTTGGAGCTTCTAAGTGCCAAGAGGGTCCAATCTTTCTCTCATATCAGACAAGATGAGAACAAAAAACTCATACAATCAATTCACTCATCCGCAGGCTCACCAATCGATCTTAGTGGGAAACTTTTCTCTTTGTTGGGAACCACTGTTTCAAGGGCAGCGTTTGGAAAAGAAAATGATGACCAAGATGAGTTTATGTCTTTGGTCAGAAAAGCTATAACAATGACAGGAGGATTTGAAGTGGATGACATGTTTCCTTCATTGAAACCGTTGCATTTACTGACCCGACAGAAGGCCAAAGTGGAGCATGTTCACCAGCGGGCAGACAAAATCTTAGAAGACATTCTCAGAAAGCATATGGAAAAACGAACAAGAGTAAAAGAAGGCAACGGTAGTGAAGCGGAGCAAGAAGATCTTGTTGATGTTCTTTTGAGACTCAAAGAAAGTGGCAGCCTCGAGGTTCCAATGACGATGGAGAACATCAAAGCTGTGATATGGAACATATTTGCTGCTGGAACTGATACCTCAGCATCAACATTGGAGTGGGCAATGTCAGAAATGATGAAAAATCCAAAAGTGAAGGAGAAGGCACAAGCTGAATTAAGACAAATATTCAAAGGAAAGGAAATAATACGTGAAACTGATCTAGAAGAACTTAGTTACCTGAAGTCAGTGATCAAAGAAACGTTGAGGTTACACCCTCCTTCTCAGTTGATTCCTAGAGAGTGCATCAAATCAACCAACATTGATGGGTACGAAATACCAATAAAAACTAAAGTCATGATAAACACATGGGCAATTGGAAGAGATCCCCAGTATTGGAGTGATGCAGATAGGTTTATCCCAGAGAGATTCAATGACAGTTCTATCGATTTCAAAGGAAATAGCTTTGAGTATATACCTTTTGGGGCAGGAAGGAGAATGTGTCCAGGCATGACATTTGGATTGGCTAGCATTACGCTTCCATTAGCTTTATTACTCTATCATTTTAATTGGGAACTCCCAAATAAGATGAAACCTGAGGATTTGGATATGGATGAACACTTCGGAATGACAGTTGCAAGAAAAAACAAGTTGTTTTTGATTCCCACTGTTTATGAAGCTTCATGA 1515 0.4092 MEYSPLSIVITFFVFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKLFSLLGTTVSRAAFGKENDDQDEFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQLIPRECIKSTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIPTVYEAS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0533 504 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Gso11g0533 504 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PANTHER OS08G0105600 PROTEIN 2 503 - -
Gso11g0533 504 PANTHER CYTOCHROME P450 71D8 2 503 - -
Gso11g0533 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0533 504 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0533 Gso-Chr11 4781519 4783986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0533 12 501 Cytochrome P450 AT3G26300 43.200 2.05e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0533 - K15472 gmx:100780605 1003.82