Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0528 ATGCAAGGGCCTCAGATAGAAAGACAAGGTGATTTGTCAACTAATTCAGATTGTCAATGCATTGGAGCTTCATGTTGTGACTGTCAAGTAGATTACCAACATGAATATTGTGGTTTTCATGATTTTGAAGAAGACATGGTAAATGAACCTTTCTTGACATCTGAGAACTCTGTCTCTGTTGTGGATACAATTGAAAGTGAATCACCAAACAACAGTAGGGAAGGAGACTTGTCATGTTCCGAACCCAAGTGGCTAGAGGGAGATGAATCTGTGGCATTGTGGATCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCCGATGTGCAAGGGCTGACTGGCCGTCATCAACTTTGAAAGCAAAACCAACTCATGACAGAAAGAAATATTTTGTTATATTTTTTCCACACACAAGGATTTATTCTTGGGCGGACATGCTGCTTGTTAGATCAATTAATGAGTATCCCCATCCTATTGCATATAAGACTCATCAGGTGGGATTGAAAATGGTAAAAGACTTAACTGTTGCACGGAGGTTTATAATGCAAAAGCTAGTCGTTGGCATGCTGAACATGGTCGATCAGTTTCATTTTAGTGCTTTGACAGAAACTGCACGTGATGTGAAGGTCTGGAAGGAATTTGCAATGGAGGCTTCTCGTTGTAATGATTATTCCAATTTTGGAAGAATGCTTCTAAAGCTGCATAATAGCATACTCCAGCACCATATAAATGCTGACTGGTTACAGCATTCTTATCCCTCTTGGGCTGAAAGATGTCAGAGTGCAAATAGCGCTGAATCAGTAGAGCTTCTAAAGGAGGAATTATTTGATTCTATTTTGTGGAATGGGGTTAATACTCTCTGGGATGCAGTTGCACCAATGCAACCAACATTAGGTTCTGAATGGAAAACCTGGAAGCAGGATGTAATGAGATGGTTTTCTACACCACCCTCCTTATCAAGCAGCAAAGACACCCGGCAACAGAGTTCTGATGATTTGTACCAAGCAAACCTTCAGGTTTGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAATCAAGGACCAAACTATTGCTCTTGAGGCTGACCCTGGCTTCTTTAAGAATCAGGACACATTGAGCACATTAGCAGCTGAGTCTTGCAAACAGGAAGGCGTTAGGGAGGTGTCTGTGGCAACTGCTTCACCTAGTAATTTGGCCAATAAATGGAATGAAATTGTAGTTGAGGCTACCGATTCTGATTTTTTGCATACCAAAGAAATGGAATCAACACCTACAAATGAACTGACTGTTGCAAATTCTGTAGAACCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTATACTGTTGTGTACATTTGTCCTCTCGATTTTTGGGCAGCCCAACAAAATCTGAAAAGCCTGTTCCAGTTGATACTCCAATGTGTGAAGGTACAACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTTTATTCTGTAAGAAACACCGACCACATGCTGAAACAGAGCAGACATCAAATTTACCCCAGAATACACTAAAGAGGAAGCACAAAGAAAATTATACTGGTTCAGAGGACATGTTTGGCAAAGACTTGGTATTGGTAAATCTTGAAAGTCCACTGCAAGTGGATCCAGTGTCATCTATTGGTGCTGATTCTGTACATGGAGAAAGCAACTTTAATGAGAAACCCATGCATTCTGAAAATGATCATAATGCAATGGTGACAATGCACTGTATAGGTTCTCCTCCCTTTGATAAGAAAAATCCTTGTATGGAAGGTCCTAAAAGGTATTGCTTGTACTGTGAAAGTCACCTTCCAAGCTGGCTTAAGCGTGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTTCACAGGACTTTTGAGGGACTGCAGCTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTATTTTACAGGTTATTCAAAAGCATTTTATCATTAAGAAACCCTGTTCCTAAGGATGTCCAATTCCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCCAATGTAGGAGAGTTTTTTACAAAGTTAGTTCACAGTGAAAAGGCAAGAATCAAGTTAATATGGGGATTCAATGATGACATGGATATAACCTCTGTCATGGAAGAACCACCACTCTTGCCATCCACAATTAATGATAACTGTGATGAGGAAAATGCCATCAAATGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTCTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCGTTTACTAACAGAAAACTATTGGAAACTCATGTTCAGGAGAGACATCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGCATTCCTTGTGGGAGTCATTTTGGAAATACTGATCAATTATGGCAACATGTTTTATCAGTTCACCCTGTTGATTTTAAACCATCAAAAGCTCCTGACCAGCAAACTTTCTCTACTGGCGAAGATTCTCCTGTAAAACATGATCAGGGAAATTCAGTCCCCTTGGAGAATAATTCTGAGAATACAGGTGGTTTACGGAAATTTGTTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCAAATCTGGCTAGCAGTCGCCCTGCAAAGAGGGGAGTTCGCTATTATGCATATAGATTAAAATCTGGCAGACTTAGCCGCCCTAGATTTAAAAAAGGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGAGGCATTCAGGCAACAAACTCACTTGGCACGGGAGGAATAACCATACCACCTCATGTTACTGAAAGTGAAACAACAAATATTGGTAGATTGGCAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCTGAGATTCAAAAAACGAAACCTCGGCCCAACAATCTTGACATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTGTAGCCTCACTGGAGGAGAAATATGGAATTTTGCCTGAAAAGCTCTATTTGAAGGCAGCAAAAATTTGCAGTGAGCATAGTATTTTGGTAAATTGGCACCAGGAGGGGTTTATTTGTCCTAGAGGTTGTAATGTATCAATGGATCAAGCTTTGCTCTCTCCGTTAGCATCGCTTCCTAGTAATTCTGTAATGCCCAAATCTGTGAATTTATCTGATCCTGCAAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCGCGTACCTTAAAATTAGGTTCAGTGCAGAAAGCTGTTATCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTACGCATTCTCTTCATATGAATGGGTGTAATGGACAAAATATAAGCTCTTCTATGCCTTGGGAGACCATTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTTAGTCTTGATTCAGAGAGTCTGCAATTGGGATGTGCCTGCTCATACACTAGTTGCTGTCCTGAAACTTGCGATCATGTATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCTTGGAGGAAGGTTATCTTGTCTATGAGTGTAATCATATGTGCAGATGCAATAAATCCTGTCCAAACAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGTGAAGTTTTAGATGTGCAAGAGGCACGCAATAGGCGCAAGAGATATGGTACAGAACATTGCAGTTATTTCTACGACATTGATGCTCGTGTTAATGATATAGGCAGATTGATTGAAGGACAAGCTCAATATGTAATTGATTCTACTAAGTTTGGAAATGTCTCAAGATTCATCAATCATAGCTGCTCACCAAATCTTGTCAATCACCAAGTTATTGTAGAGAGCATGGATTGTGAACGTGCACATATTGGTTTTTATGCAAGTCGAGATATTACTTTGGGTGAAGAGCTAACGTATGACTATCAGTACGAGCTTATGCCTGGAGAAGGATCTCCTTGTCTTTGCGAATCCTTGAAGTGTAGGGGACGCCTTTATTAG 4338 0.4066 MQGPQIERQGDLSTNSDCQCIGASCCDCQVDYQHEYCGFHDFEEDMVNEPFLTSENSVSVVDTIESESPNNSREGDLSCSEPKWLEGDESVALWIKWRGKWQAGIRCARADWPSSTLKAKPTHDRKKYFVIFFPHTRIYSWADMLLVRSINEYPHPIAYKTHQVGLKMVKDLTVARRFIMQKLVVGMLNMVDQFHFSALTETARDVKVWKEFAMEASRCNDYSNFGRMLLKLHNSILQHHINADWLQHSYPSWAERCQSANSAESVELLKEELFDSILWNGVNTLWDAVAPMQPTLGSEWKTWKQDVMRWFSTPPSLSSSKDTRQQSSDDLYQANLQVCRKRPKLEVRRADTHASQVEIKDQTIALEADPGFFKNQDTLSTLAAESCKQEGVREVSVATASPSNLANKWNEIVVEATDSDFLHTKEMESTPTNELTVANSVEPGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSPTKSEKPVPVDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQTSNLPQNTLKRKHKENYTGSEDMFGKDLVLVNLESPLQVDPVSSIGADSVHGESNFNEKPMHSENDHNAMVTMHCIGSPPFDKKNPCMEGPKRYCLYCESHLPSWLKRARNGKSRIVSKEVFTGLLRDCSSWEQKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDSNVGEFFTKLVHSEKARIKLIWGFNDDMDITSVMEEPPLLPSTINDNCDEENAIKCKICSAEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNRKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTDQLWQHVLSVHPVDFKPSKAPDQQTFSTGEDSPVKHDQGNSVPLENNSENTGGLRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKGLAAASYRLRNKANANLKRGIQATNSLGTGGITIPPHVTESETTNIGRLAEHQCSAVSKILFSEIQKTKPRPNNLDILSIARSACCKVSLVASLEEKYGILPEKLYLKAAKICSEHSILVNWHQEGFICPRGCNVSMDQALLSPLASLPSNSVMPKSVNLSDPASDEWEVDEFHCIINSRTLKLGSVQKAVILCDDISFGKESVPVICVVDQELTHSLHMNGCNGQNISSSMPWETITYVTKPMLDQSLSLDSESLQLGCACSYTSCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVQEARNRRKRYGTEHCSYFYDIDARVNDIGRLIEGQAQYVIDSTKFGNVSRFINHSCSPNLVNHQVIVESMDCERAHIGFYASRDITLGEELTYDYQYELMPGEGSPCLCESLKCRGRLY* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0528 1445 Pfam SET domain 1301 1421 IPR001214 GO:0005515
Gso11g0528 1445 ProSiteProfiles SET domain profile. 1290 1422 IPR001214 GO:0005515
Gso11g0528 1445 SMART preset_2 1147 1274 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso11g0528 1445 ProSiteProfiles Post-SET domain profile. 1429 1445 IPR003616 -
Gso11g0528 1445 ProSiteProfiles Pre-SET domain profile. 1211 1287 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso11g0528 1445 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 7 1445 - -
Gso11g0528 1445 ProSiteProfiles Zinc finger C2H2 type domain profile. 793 816 IPR013087 -
Gso11g0528 1445 MobiDBLite consensus disorder prediction 859 887 - -
Gso11g0528 1445 Pfam Pre-SET motif 1150 1282 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso11g0528 1445 SMART set_7 1290 1428 IPR001214 GO:0005515
Gso11g0528 1445 ProSiteProfiles Zinc finger C2H2 type domain profile. 896 924 IPR013087 -
Gso11g0528 1445 Pfam Zinc finger C2H2-type, 3 repeats 795 920 IPR040689 -
Gso11g0528 1445 SUPERFAMILY SET domain 1139 1435 IPR046341 -
Gso11g0528 1445 Gene3D SET domain 1128 1426 IPR046341 -
Gso11g0528 1445 ProSitePatterns Zinc finger C2H2 type domain signature. 761 782 IPR013087 -
Gso11g0528 1445 Gene3D Classic Zinc Finger 753 823 - -
Gso11g0528 1445 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 7 1445 - -
Gso11g0528 1445 ProSitePatterns Zinc finger C2H2 type domain signature. 829 850 IPR013087 -
Gso11g0528 1445 ProSitePatterns Zinc finger C2H2 type domain signature. 898 919 IPR013087 -
Gso11g0528 1445 MobiDBLite consensus disorder prediction 858 887 - -
Gso11g0528 1445 SMART c2h2final6 759 782 IPR013087 -
Gso11g0528 1445 SMART c2h2final6 896 919 IPR013087 -
Gso11g0528 1445 SMART c2h2final6 793 816 IPR013087 -
Gso11g0528 1445 SMART c2h2final6 827 850 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0528 Gso-Chr11 4709338 4722882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0528 41 1444 C2H2 Transcription Factor Family AT2G23740 51.505 0.0 1407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso11g0528 Pre-SET 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0528 - - gmx:100776704 2991.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0528 11 4709338 4722882 Gso11g0528 11 4709338 4722882 ECH
Gso1g1547 1 52162236 52176618 Gso11g0528 11 4709338 4722882 GST