Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0514 ATGGATGCTTTTCAGTTCAAAACTATTATTTCAGGCATTCTTGCCCTGCTAGCATGCGCCTTGTTTTATCAATTTAAGAAAACACTTTGTGGCAATACAAAGAAGATCTGTAGGGCACCTCAAGCAGCAGGTGCATGGCCTATCATTGGCCATTTGCACCTCTTCAATGCTCATCAACTCACACACAAAACACTTGGCAAAATGGCTGAGAAACATGGTCCAATTTTCACAATAAAGCTTGGTTCATACAAAGTTCTAGTATTGAGTAGCTGGGAGATGGCCAAGGAGTGTTTCACTGCCCATGACAAAGCATTCTCCACCAGACCCTGTGTTGCAGCCTCAAAGCTAATGGGCTACAACTATGCCATGTTTGGTTTCACTCCTTATGGCTCGTACTGGCGCCAGGTGCGAAAATTAACCACCATAGAGCTTCTTTCTAACAACCGTCTTGAGCCACTCAAGGACACAAGAACGGTTGAGTTAGATGCTGCAATAAGGGAGCTTTATAAGGTTTGGACAAGAGAAGGTTGTCCAAAGGGAGGGGTTTTGGTGGATATGAAGCAGTGGTTTGGTGATTTGACTCATAATATTGCTCTGAGAATGGTGGGAGGGAAGTCATATAGTGGGGTTGGTGATGATGATCATGCAGAAGGTGAGGCAAGAAGGTATAGGAGAGTTATGAGAGACTGGGTGTGTTTGTTTGGGGTGTTTGTGTTGTCTGATTCATTTCCATTTCTGGGGTGGTTGGATATCAATGGATATGAAAAGGATATGAAGAGAACCGCCAGTGAATTGGATGCTCTGGTTGAAGGGTGGCTTGAGGAACACAAAAGGAAAAGGAAAAGGAAAAGAGGTTTGAGTGTGAATGGAAAGGAAGAACAGGATGATTTCATGGATGTCATGCTGAATGTTCTGCAGGGTACAGAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCTACTTGCCTGAATTTGATTTTAGCAGGAACTGACCCCACCATGGTCACGCTAACATGGGCACTATCTCTGCTACTTAACCATCAAATGGAACTTAAAAGAGCCCGACATGAACTGGACACTCTTATTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAAGTTAGTGTACCTCCAAGCTGTTGTGAAGGAAACTCTGCGCCTGTATCCACCAAGTCCCATTATCACCCTTCGTGCCGCCATGGAAGACTGCACCTTTTCATGTGGCTATCACATTCCTGCTGGCACACAATTAATGGTGAATGCTTGGAAGATCCACAGGGATGGTCGTGTTTGGAGTGAACCTAATGATTTCAAGCCTGAGAGGTTCTTGACAATCCACAAAGATGTTGATGTAAAGGGTCAGAACTATGAGCTCGTCCCTTTTAGTTCTGGAAGGCGAGCATGCCCTGGGGCCTCGCTCGCTCTGCGTGTGGTGCACTTGACCTTGGCTAGACTCTTACATTCTTTCGATGTTGCTTCTCCTTCAAATCAAGTTGTTGACATGACAGAGAGCTTTGGACTCACAAATTTAAAAGCAACCCCGCTTGAAGTTCTCCTAACTCCACGTCTAGACACCAAATTTTATGAGGACTATATTATATTAAGCTAG 1617 0.444 MDAFQFKTIISGILALLACALFYQFKKTLCGNTKKICRAPQAAGAWPIIGHLHLFNAHQLTHKTLGKMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTAHDKAFSTRPCVAASKLMGYNYAMFGFTPYGSYWRQVRKLTTIELLSNNRLEPLKDTRTVELDAAIRELYKVWTREGCPKGGVLVDMKQWFGDLTHNIALRMVGGKSYSGVGDDDHAEGEARRYRRVMRDWVCLFGVFVLSDSFPFLGWLDINGYEKDMKRTASELDALVEGWLEEHKRKRKRKRGLSVNGKEEQDDFMDVMLNVLQGTEISGYDSDTIIKATCLNLILAGTDPTMVTLTWALSLLLNHQMELKRARHELDTLIGKDRKVEESDIKKLVYLQAVVKETLRLYPPSPIITLRAAMEDCTFSCGYHIPAGTQLMVNAWKIHRDGRVWSEPNDFKPERFLTIHKDVDVKGQNYELVPFSSGRRACPGASLALRVVHLTLARLLHSFDVASPSNQVVDMTESFGLTNLKATPLEVLLTPRLDTKFYEDYIILS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0514 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Gso11g0514 538 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso11g0514 538 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 Coils Coil 345 365 - -
Gso11g0514 538 SUPERFAMILY Cytochrome P450 45 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PANTHER CYTOCHROME P450 CYP82D47-LIKE 1 531 - -
Gso11g0514 538 Gene3D Cytochrome P450 31 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0514 538 PANTHER CYTOCHROME P450 82C3-RELATED 1 531 - -
Gso11g0514 538 Pfam Cytochrome P450 41 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0514 Gso-Chr11 4590754 4593419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0514 39 531 Cytochrome P450 AT4G31940 51.600 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0514 - - gmx:100777753 1093.18