Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0513 ATGAATTTGGTCCTCAGGAGGGTCATGGGCATGGCCATGGATGCTTTCCAGCACCAAACTCTCATTTCCATCATTCTGGCCATGTTAGTAGGCGTGTTGATTTATGGCTTAAAGAGAACACATAGTGGCCATGGCAAGATCTGTAGTGCACCTCAAGCAGGAGGAGCATGGCCAATTATTGGCCATTTACACCTCTTTGGGGGTCATCAACATACTCACAAAACACTTGGGATAATGGCAGAGAAACATGGACCAATTTTCACAATAAAGCTTGGTTCATACAAAGTTCTTGTATTGAGTAGCTGGGAGATGGCCAAGGAGTGTTTCACTGTCCATGACAAAGCATTTTCTACCAGACCCTGTGTTGCAGCCTCAAAGCTAATGGGCTACAACTATGCCATGTTTGGCTTCACTCCTTATGGTCCTTATTGGCGTGAGATAAGGAAATTAACTACTATTCAGCTTCTATCTAACCACCGGCTTGAACTGCTGAAGAACACAAGAACATCTGAGTCAGAAGTTGCAATAAGAGAGCTTTATAAGTTGTGGTCTAGAGAAGGTTGTCCAAAGGGAGGGGTTTTGGTAGATATGAAGCAGTGGTTTGGGGATTTAACTCATAATATTGTTCTGAGAATGGTGAGAGGGAAGCCATACTATGATGGTGCTAGTGATGATTATGCAGAAGGTGAAGCAAGAAGGTACAAGAAAGTTATGAGAGAGTGTGTGAGTTTGTTTGGGGTGTTTGTGTTATCTGATGCTATTCCATTTCTGGGGTGGTTGGACATCAACGGATATGAAAAGGCCATGAAGAGAACTGCAAGTGAATTGGATCCTCTGGTTGAAGGGTGGTTAGAGGAACACAAAAGGAAAAGAGCTTTCAATATGGATGCAAAAGAAGAACAGGATAATTTCATGGATGTCATGCTGAATGTTCTGAAAGATGCAGAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCTACTTGTCTGAATCTGATTTTAGCAGGAAGCGACACCACCATGATTTCACTAACATGGGTGCTATCTCTGCTACTTAACCATCAAATGGAACTAAAAAAAGTCCAAGATGAATTGGACACTTATATTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAACCAAGTTGGTGTACCTCCAAGCCATTGTGAAGGAAACAATGCGGCTGTATCCACCAAGTCCTCTTATCACCCTTCGTGCAGCCATGGAAGACTGCACCTTCTCAGGTGGCTATCACATTCCTGCTGGTACACGTTTAATGGTGAATGCTTGGAAGATCCACCGGGATGGTCGTGTTTGGAGTGATCCTCATGATTTCAAGCCTGGAAGGTTCTTGACAAGCCACAAAGATGTTGATGTGAAGGGTCAGAACTATGAGCTCGTCCCTTTTGGTTCTGGAAGGAGAGCATGCCCTGGAGCCTCGCTGGCTCTGCGTGTGGTGCACTTGACCATGGCTAGACTGTTACATTCTTTCAATGTTGCTTCTCCTTCAAATCAAGTTGTGGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCAACCCCGCTTGAAATTCTCCTAACTCCACGTCTAGACACCAAACTTTATGAGAACTAG 1623 0.4381 MNLVLRRVMGMAMDAFQHQTLISIILAMLVGVLIYGLKRTHSGHGKICSAPQAGGAWPIIGHLHLFGGHQHTHKTLGIMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVAASKLMGYNYAMFGFTPYGPYWREIRKLTTIQLLSNHRLELLKNTRTSESEVAIRELYKLWSREGCPKGGVLVDMKQWFGDLTHNIVLRMVRGKPYYDGASDDYAEGEARRYKKVMRECVSLFGVFVLSDAIPFLGWLDINGYEKAMKRTASELDPLVEGWLEEHKRKRAFNMDAKEEQDNFMDVMLNVLKDAEISGYDSDTIIKATCLNLILAGSDTTMISLTWVLSLLLNHQMELKKVQDELDTYIGKDRKVEESDITKLVYLQAIVKETMRLYPPSPLITLRAAMEDCTFSGGYHIPAGTRLMVNAWKIHRDGRVWSDPHDFKPGRFLTSHKDVDVKGQNYELVPFGSGRRACPGASLALRVVHLTMARLLHSFNVASPSNQVVDMTESIGLTNLKATPLEILLTPRLDTKLYEN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0513 540 Pfam Cytochrome P450 51 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Gso11g0513 540 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 Gene3D Cytochrome P450 45 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PANTHER CYTOCHROME P450 CYP82D47-LIKE 13 538 - -
Gso11g0513 540 SUPERFAMILY Cytochrome P450 56 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0513 540 PANTHER CYTOCHROME P450 82C3-RELATED 13 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0513 Gso-Chr11 4580808 4583167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0513 20 538 Cytochrome P450 AT4G31940 50.857 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0513 - - gmx:606549 1098.96