Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0494 ATGGGTCTCTGCACTTCGAAACCCACTCATTACTCTCCTCAATCCGCCACTCGCTCCCCCGCGGCACCTTCTCAAAACGACGCCGTCACACTCACTCTCAGCGCCGAACCTCACGCCAATGGCGAAAACCAAAACCCTAAGGAGCCCGAGAACAGCGGTACGAGATCTCCGTTTTTCCCATTCTATAGTCCCAGTCCGGGCCGCTACGTGTTCCCGGTCTCTCCGCGGCGCTTCTTCAAGCGCCCGTTTCCGCCGCCGTCGCCTGCCAAGCATATAAAGGCGGCACTGGCGCGTCGGCACGGCTCGGTGAAGCCCAATGAGGCTGCCATACCGGAGGCCGAGGCGGTCGCCGGACTCGACAAGAACTTCGGATTCTCCAAGCATTTCGGAAATAAATATGAACTTGGAGGTGAGGTTGGGAGAGGGCATTTTGGGTACACCTGTGTTGCGAAGGTGAAGAAAGGAGAGCTGAAGGGACAGCAAGTGGCCGTTAAAGTCATTCCAAAAGCCAAGATGACCACTGCAATTGCTATCGAGGATGTGAGAAGGGAAGTAAAAATATTGAAAGCTTTGACTGGACACAAGAATCTAGTACAATTCTATGATGCATATGAAGACCACGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTGTTAGACAGAATATTATCAAGAGGAGGGAAGTACACAGAGGAAGATGCAAAAGCTGTCCTGAGACAAATACTGAATGTAGTTGCCTTTTGCCATTTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCGCATCCAAGGATGAGAGCTCAAAGCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACTAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTACGTGGCTCCCGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGTAGCCGTCCCTTTTGGGCCCGAACCGAGTCTGGTATCTTTCGTGCGGTATTGAAAGCTGACCCAATTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAACCAATTTTGTTAAGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCGTTAAGTCATCCATGGATTAGAAACAAGGATGTAAAATTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATATATGTGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGCTAACTGTTGATGAGCTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCACCATTAACTTGGAAAATATCAAAGTGGTCTTGATGGTAAATGCAACAGATGCTATGAAGGAGTCACGCATACCTGACTTTTTGGCATCACTTAATGCATTACAATATAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCCCTTAGTGTTCATCAACTTGAAACACTTGACCAGTGGGAGCAAAATGCACGTTGTGCCTATGACTTTTTTGAAAAGGATGGAAACAAGGCTATAGTCATTGACGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTCCATGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGATTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCTATAG 1758 0.459 MGLCTSKPTHYSPQSATRSPAAPSQNDAVTLTLSAEPHANGENQNPKEPENSGTRSPFFPFYSPSPGRYVFPVSPRRFFKRPFPPPSPAKHIKAALARRHGSVKPNEAAIPEAEAVAGLDKNFGFSKHFGNKYELGGEVGRGHFGYTCVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILKALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFASKDESSKLKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPIFDEPPWPSLSDEATNFVKRLLNKDPRKRMSAAQALSHPWIRNKDVKLPLDILIFKLMKAYMCSSSLRKAALRALSKTLTVDELFYLREQFALLEPSKNGTINLENIKVVLMVNATDAMKESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLETLDQWEQNARCAYDFFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0494 585 SUPERFAMILY Protein kinase-like (PK-like) 130 422 IPR011009 -
Gso11g0494 585 CDD STKc_CAMK 132 394 - -
Gso11g0494 585 Gene3D - 434 503 - -
Gso11g0494 585 MobiDBLite consensus disorder prediction 1 58 - -
Gso11g0494 585 SMART serkin_6 133 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0494 585 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Gso11g0494 585 Pfam Protein kinase domain 133 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0494 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 580 - -
Gso11g0494 585 Gene3D Phosphorylase Kinase; domain 1 126 222 - -
Gso11g0494 585 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 40 580 - -
Gso11g0494 585 ProSiteProfiles Protein kinase domain profile. 133 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0494 585 SUPERFAMILY EF-hand 422 576 IPR011992 -
Gso11g0494 585 Gene3D - 412 573 - -
Gso11g0494 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Gso11g0494 585 Gene3D Transferase(Phosphotransferase) domain 1 223 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0494 Gso-Chr11 4405220 4410736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0494 1 584 EF-hand Containing Proteins AT3G50530 72.240 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso11g0494 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0494 K00924 - gmx:100815721 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1582 1 52481970 52487474 Gso11g0494 11 4405220 4410736 GST