Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0487 ATGTCTGCTCAGGTCGGTGTCAGGACACGAGCCCAAGCCGCATTAGCCATGGAAGCTGTTAGTTCTGCTGAACCATCATCCAAGAGAAAGAAGATCAGCAACAGTACTAACCAAGAGCCAAAACTCTCCAAGACTCCGAGAACGAGTTCTTCCTCCGCTGTCAAACCAGCGACGGTGACGGAGATGGTTCAGCCGGTGTCGCCGGAGATGGTTCAGCAACGCTGCCTGAGCCCTACCTCCAGTGAAATTCCGGCGTCTTGCTGCTCCAGCAACGGATCCATTGGCCTCGATCAGGACAGGATCAAGCTCTTAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACGTCGACGTGCAATGGTGGTCATGAAATTGAGAGGAGAGAGATGAAACGTTCCAGCGAGCTTCGCGAGAATTCTCAGGAGCCGGAGCCAATGGAGATCAATTCTCACCGTGTCTTATCAAAGGCAAAAGCCATGCCTACCGAATTGGAGCTCGAGGAATTCTTCGCTGCCTCGGAGAAAGACATTCAGAAACGATTTCAAGACAGATACAATTATGATATTGTTAAGGACGTACCGCTGGAAGGACGCTACGAGTGGGTTCAGTTGAAGCCTTGA 618 0.5146 MSAQVGVRTRAQAALAMEAVSSAEPSSKRKKISNSTNQEPKLSKTPRTSSSSAVKPATVTEMVQPVSPEMVQQRCLSPTSSEIPASCCSSNGSIGLDQDRIKLLDLEVESAQVETSTCNGGHEIERREMKRSSELRENSQEPEPMEINSHRVLSKAKAMPTELELEEFFAASEKDIQKRFQDRYNYDIVKDVPLEGRYEWVQLKP* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0487 205 MobiDBLite consensus disorder prediction 18 65 - -
Gso11g0487 205 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 205 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gso11g0487 205 MobiDBLite consensus disorder prediction 26 58 - -
Gso11g0487 205 Pfam Cyclin-dependent kinase inhibitor 159 203 IPR003175 GO:0004861|GO:0005634|GO:0051726
Gso11g0487 205 MobiDBLite consensus disorder prediction 120 150 - -
Gso11g0487 205 MobiDBLite consensus disorder prediction 114 154 - -
Gso11g0487 205 PIRSF CKI_KRP_plant 1 205 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gso11g0487 205 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 3 205 - -
Gso11g0487 205 Gene3D p27 149 205 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0487 Gso-Chr11 4317091 4318924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0487 160 205 Core Cell Cycle Gene Families AT1G49620 65.217 8.14e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0487 - - gmx:547743 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1591 1 52602461 52604366 Gso11g0487 11 4317091 4318924 GST
Gso11g0487 11 4317091 4318924 Gso5g0793 5 19751889 19753902 PCT
Gso11g0487 11 4317091 4318924 Gso17g1489 17 18552464 18554205 PCT
Gso5g0793 5 19751889 19753902 Gso11g0487 11 4317091 4318924 PCT
Gso17g1489 17 18552464 18554205 Gso11g0487 11 4317091 4318924 PCT