Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0473 ATGAAGGACTTGAAAACTTTAAAGGAATTGGTGGCAAGCATTACAGATTGGAAGTCGCTTGAGAAGATGTCTTGCAAACCCTTTAAGCCTTCCATTTTGCATTTGGCAATATCAAAAGATGCGCCCCAGTTATATCGCGAAGAAGAGTTGATTCAATTAAAGAATTTCAGCAAACTACTTTCAAGTGTTGAATCGAAGCCAAAGACTAACAATACTGGTCAGAGGATGACCAGAAAAAGACAAATTGAAGAGATGCCTAAAGAGGAAAGAGTCACACCAGCAATGATTAAAAAACCAAGAAGGATAATCTTGGTACAGAACGGACCATCACCAGATTTGCCTGCAGAATTCAAGGATCGAGTCTCTGAGTTGAGTGGCCATGATCTTAAATTTCTCATGCACAAGAGACTCTTCTGCTCAGATGTGAAGTCGAATAGCAACCGTATGTCAATGCCCATAAATGAAATTAAGTGTGAATTTCTCACCGAAGCTGAAATTACTAAATTGGATGAAAGAGATGGTCCGAATGGTAAAGGACGACTTGTTGGTGTGGAGGTGACTGTGTTGGACCCATGCTTGAGAGAATTTACTTTACTATTGAAGAAGTGGAGCATGCAAAGGACTGACACCTACAACCTCGTAACAAATTGGAATAGCATCGTATCTACTAATAAGTTTGAAGAAGACCAAGAACTCCAAATTTGGTCTTTTAGGGTTGGGAGCAAGCTTTATCTTCTACTAAACAAACTACAAATTGATGAGATGCCTAAAGAGGAAAGAGTCACGTCAGCAATGATTAAAAAACCAAGAAGGATAATCTTGGTACAGAACGGACCATCACCAGATTTGCCTGCAGAATTCAAGAATCGAGTCTGA 876 0.3961 MKDLKTLKELVASITDWKSLEKMSCKPFKPSILHLAISKDAPQLYREEELIQLKNFSKLLSSVESKPKTNNTGQRMTRKRQIEEMPKEERVTPAMIKKPRRIILVQNGPSPDLPAEFKDRVSELSGHDLKFLMHKRLFCSDVKSNSNRMSMPINEIKCEFLTEAEITKLDERDGPNGKGRLVGVEVTVLDPCLREFTLLLKKWSMQRTDTYNLVTNWNSIVSTNKFEEDQELQIWSFRVGSKLYLLLNKLQIDEMPKEERVTSAMIKKPRRIILVQNGPSPDLPAEFKNRV* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0473 291 Pfam B3 domain-containing protein At2g31720-like 126 222 IPR005508 GO:0003677
Gso11g0473 291 PANTHER DUF313 DOMAIN PROTEIN 1 260 - -
Gso11g0473 291 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 1 260 IPR005508 GO:0003677
Gso11g0473 291 SUPERFAMILY DNA-binding pseudobarrel domain 132 246 IPR015300 -
Gso11g0473 291 Gene3D - 122 254 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0473 Gso-Chr11 4181414 4183535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0473 123 251 B3 DNA Binding Superfamily AT1G05930 26.718 2.82e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0473 - - gmx:102663171 580.867