Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0471 ATGAATAGCAATACCACCGGCGCTGCAGCAATGAACGACCAGCTCTCCAACACCACCTCCATCTTCGGCCTCCGCCTATGGGTGGTTCTCGGGGTGTGCGTGGGCGCCGCCATCGTCCTCATCCTCTTCCTCATCTCTGTCTGGCTCGCCTTCAAGCGCTCTTCCAAAACCAACCCTGTTTCCATCCCCGACGTCTCCAAAGAGATCCAAGAAATCAGGCTCGACACCAACCCCACTCTCCAACCCGAACCTTACCCCGAACCTGACCCCGTTCCTCCCACCGAAGAGGAAACCAACTCCCTCGGCTACCACAGAATCCAGTTCGAGATTGGGAAGAACCACCGAATCTCGTACCCGGAGCGTGCCTTGCTTCGCTCCAGCTCCAATGACCCCAGCAGCGGCGAGGTTCAGCTTCCCACCGTCATTCCCGAAGTTTCTCACTTGGGTTGGGGCCACTGGTACACTCTAAGAGACTTGGAAGACGCCACTAACGGCTTCGCACCTGAGAATGTTATCGGCGAAGGTGGATACGGAATTGTTTATCACGGTATCTTGAACGACAATACGAATGTTGCTATTAAAAATTTGCTCAATAATAGGGGCCAAGCTGAGAAGGAGTTCAAGGTTGAAGTGGAAGCTATAGGACGTGTTCGCCACAAGAATTTAGTCAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTACGTGGACAATGGTAATTTAGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTAACTTGGGAAATTCGAATGAACATTATTCTGGGAACGGCTAAAGGATTAACTTATCTTCACGAGGGGTTAGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGCTCAGTAAGAAGTGGAATGCGAAGGTTTCAGACTTTGGCCTCGCAAAACTCCTTGGCTCTGACAGCAGCTATATCACAACCCGTGTCATGGGTACATTTGGATATGTTGCTCCTGAATACGCGAGTACTGGCATGTTGAATGAACGGAGTGATGTTTATAGTTTTGGAATTCTTATTATGGAACTAATTACAGGAAGGAATCCGGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTGGTAGACTGGCTCAAGAAGATGGTTAGCAACAGAAATCCAGAGGGGGTGCTTGATCCCAAGCTTCCTGAGAAACCAACTTCAAGAGCACTAAAACGAGCTCTTCTTGTAGCTTTACGCTGCACTGATCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGCAGAGCTAAAAGGGATGCAGGACATTCACCTAATGATAGAGTAGGGGATGGGTTGAAAGAGGAGGTAACTGTGTCTGTGTCAGTTGATGATGGTAAGCTTGAAAATGGGATGTGTGCCAATGAGACAAGATCGAACCCTCAAATAGAAAAGCAATAA 1500 0.4807 MNSNTTGAAAMNDQLSNTTSIFGLRLWVVLGVCVGAAIVLILFLISVWLAFKRSSKTNPVSIPDVSKEIQEIRLDTNPTLQPEPYPEPDPVPPTEEETNSLGYHRIQFEIGKNHRISYPERALLRSSSNDPSSGEVQLPTVIPEVSHLGWGHWYTLRDLEDATNGFAPENVIGEGGYGIVYHGILNDNTNVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKKWNAKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMELITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRAKRDAGHSPNDRVGDGLKEEVTVSVSVDDGKLENGMCANETRSNPQIEKQ* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0471 499 MobiDBLite consensus disorder prediction 75 98 - -
Gso11g0471 499 SMART serkin_6 166 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0471 499 Gene3D Phosphorylase Kinase; domain 1 146 241 - -
Gso11g0471 499 MobiDBLite consensus disorder prediction 438 475 - -
Gso11g0471 499 SUPERFAMILY Protein kinase-like (PK-like) 143 438 IPR011009 -
Gso11g0471 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Gso11g0471 499 PANTHER OS01G0323000 PROTEIN 7 490 - -
Gso11g0471 499 PANTHER RECEPTOR-LIKE KINASE PLANT 7 490 - -
Gso11g0471 499 Coils Coil 186 206 - -
Gso11g0471 499 MobiDBLite consensus disorder prediction 438 499 - -
Gso11g0471 499 CDD STKc_IRAK 172 438 - -
Gso11g0471 499 ProSiteProfiles Protein kinase domain profile. 166 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0471 499 Gene3D Transferase(Phosphotransferase) domain 1 242 455 - -
Gso11g0471 499 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Gso11g0471 499 Pfam Protein kinase domain 169 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0471 Gso-Chr11 4161941 4164896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0471 17 433 Trihelix Transcription Factor Family AT1G68690 40.000 7.50e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso11g0471 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0471 - - gmx:100797440 988.023