Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0469 ATGACTCTGATTAAGGAATTAGAGCAACAACCAAACCAAATTGCTGGCCACAAAGAACTCGCTCACAAAAGTCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTACCCAAGAGAGCATGAGAGCTTGAAGGAGCTAAGAGAGTTGACGGAAAAACACCCTTGGAACCTGATGGCTACACCACCTGACGAAGGACAACTTCTAGGCATGCTACTTAAGCTTATCAATGCCAAGAACACCATGGAAATAGGCGTCTTCACTGGTTACTCCTTGCTTTCCACTGCCCTCGCCCTCCCTTCTGACGGAAAGATCTTAGCTATGGATGTTAACCGGGAATATTATGAACTGGGGTTGCCTGTGATTCAAAAGGCCGGAGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGATCAACTCATCAAAGACGAAAAGAATAAGGGAGCGTTCGATTTCATCTATGTGGATGCTGATAAGGACAACTACTTGAACTACCACAAGAGGGTGATTGAGCTTGTGAAGGTTGGGGGACTGGTCGGCTACGACAACACCCTATGGAATGGGTCTGTGGTGGCCCCACCCGATGCGCCTCTCATGGATTATGTTAAGTATTATCGCGATTTTGTGATGGAGCTCAACAAAGCTCTTGCACTTGATTCAAGGGTCGAGATTTGCCAGCTTCCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 750 0.4733 MTLIKELEQQPNQIAGHKELAHKSLLQSDALYQYILETSVYPREHESLKELRELTEKHPWNLMATPPDEGQLLGMLLKLINAKNTMEIGVFTGYSLLSTALALPSDGKILAMDVNREYYELGLPVIQKAGVAHKIDFREGPALPLLDQLIKDEKNKGAFDFIYVDADKDNYLNYHKRVIELVKVGGLVGYDNTLWNGSVVAPPDAPLMDYVKYYRDFVMELNKALALDSRVEICQLPVGDGITLCRRII* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0469 249 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 6 249 - -
Gso11g0469 249 CDD AdoMet_MTases 90 188 - -
Gso11g0469 249 PANTHER O-METHYLTRANSFERASE-RELATED 6 249 - -
Gso11g0469 249 Gene3D Vaccinia Virus protein VP39 13 249 IPR029063 -
Gso11g0469 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Gso11g0469 249 Pfam O-methyltransferase 37 248 IPR002935 GO:0008171
Gso11g0469 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0469 Gso-Chr11 4139145 4141937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0469 8 248 Monolignol Biosynthesis Gene Families AT4G34050 77.593 1.23e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0469 K00588 - gmx:100795858 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1613 1 52797918 52799859 Gso11g0469 11 4139145 4141937 GST
Gso11g0469 11 4139145 4141937 Gso17g1444 17 16152380 16154713 PCT
Gso17g1444 17 16152380 16154713 Gso11g0469 11 4139145 4141937 PCT