Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0451 ATGCCTCGCCCACATTCTCCTTCTTTCCTCCTCTGTCAAGAACACTACTCTTTCACTTTCCAACAACATTCTCAAACTCTCTCCAACACCCAACCTTCTCCTTTGACTTTTCCCGACAACCTCCAACACGACCTCCTTCTCTCTCTACTCTCCAAACAGCGCGCCACGCATTCCACTCTCTCCCCTCGCCACCACGTTGTACGTTTGATTTCTAAACTCTCCAACTTCCACGGCTTCTCTCCTCTCACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCGCCACCCTAAGGTTTCAGAGCGAACTAAAACCATGGATGACTCAACTGACCGCAGTTGCTTGCGTCTCTCTCGCCGCCAAAGTGGAGGAGACACGAGTGCCACTTCTTTCGGACTTCCAAGTGGAGGAATCGAAATTCTTGTTTGAAGCAAAGACTATACAGAGAATGGAACTCCTTGTGTTGTCCACTCTCGAATGGAAAATGAACCCCGTCACCCCAATTTCTTTCTTTCAACACTTTCTCACAAGCCTTGGTTTAAAGCGCCATTTGCATTCGGAGTCTCTCCGTAGGTGCCAACGTCTTCTTCTCTCTGTCATTGCAGTGGCTGCTGCTATAATGATCCACGTTATCAAAGAGATTGAGCCGTTGAATGCTACGGAGTACCGAAATCAGCTACTTGGTTTACTTAAAACTAGTGAGGAACAAGTGGATGAGTGCTACAAACTTATGTTGAGACTATTAGTTTGCAGCAAAGGCATTCACAATCTTAGGCGCAAGCGTTTGTCTGAACCTAGTAGCCCAGATGGGGTCATTGATGCATCTTTCAGTTGTGACAGTTCAAATGATTCGTGGACAGTTGCATCACCTTCAGTGGGGCCACTGATTAAGAGGAGAAAACCTCAGGACCAGCAGATGCCGCTGCCTCCGGTGAATCGAGTGGCCATTGATGTTCTAAAAACTCCTCGTTAA 975 0.4759 MPRPHSPSFLLCQEHYSFTFQQHSQTLSNTQPSPLTFPDNLQHDLLLSLLSKQRATHSTLSPRHHVVRLISKLSNFHGFSPLTTVLAVNYFDRFVATLRFQSELKPWMTQLTAVACVSLAAKVEETRVPLLSDFQVEESKFLFEAKTIQRMELLVLSTLEWKMNPVTPISFFQHFLTSLGLKRHLHSESLRRCQRLLLSVIAVAAAIMIHVIKEIEPLNATEYRNQLLGLLKTSEEQVDECYKLMLRLLVCSKGIHNLRRKRLSEPSSPDGVIDASFSCDSSNDSWTVASPSVGPLIKRRKPQDQQMPLPPVNRVAIDVLKTPR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0451 324 PANTHER CYCLIN-D3-2 29 304 - -
Gso11g0451 324 SMART cyclin_7 68 157 IPR013763 -
Gso11g0451 324 Gene3D - 165 243 - -
Gso11g0451 324 SMART Cyclin_C_2 166 281 IPR004367 -
Gso11g0451 324 PANTHER CYCLINS 29 304 IPR039361 -
Gso11g0451 324 SUPERFAMILY Cyclin-like 48 164 IPR036915 -
Gso11g0451 324 Pfam Cyclin, C-terminal domain 166 254 IPR004367 -
Gso11g0451 324 Pfam Cyclin, N-terminal domain 56 164 IPR006671 -
Gso11g0451 324 Gene3D - 57 164 - -
Gso11g0451 324 CDD CYCLIN 63 156 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0451 Gso-Chr11 3991134 3993275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0451 44 314 Core Cell Cycle Gene Families AT5G67260 46.205 6.21e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0451 K14505 - gmx:100807175 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1631 1 52979225 52981407 Gso11g0451 11 3991134 3993275 GST
Gso11g0451 11 3991134 3993275 Gso20g1011 20 39883370 39886042 PCT
Gso11g0451 11 3991134 3993275 Gso10g2345 10 50384749 50387037 PCT
Gso5g0849 5 27502647 27504520 Gso11g0451 11 3991134 3993275 PCT
Gso17g1420 17 15457021 15458936 Gso11g0451 11 3991134 3993275 PCT