Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0434 ATGTTTACCATGGAAATGTTTAAGAAACCTTTCTTTGCAACTACTTTTGTTTTGTTTATGATCCTTTGCGATGTATCATTGGCGACAAAAGATAACCAAAAGAATACTTACATAGTCCACATGGCCAAATCCAAAATGCCAGCAAGCTTCAACCACCATTCAGTTTGGTATAAATCGATTATGAAATCAATATCTAACTCAACAGAGATGCTCTACACCTATGACAACACAATCCATGGATTGTCAACAAGATTAACACTGGAAGAAGCCCGATTATTGAAGAGTCAAACTGGGATTCTAAAGGTACTACCAGAGAAAATATATAAGCCACTCACAACTCGAACACCAAAATTCCTCGGGTTAGATAAAATCGCTGATATGTTCCCTAAATCAAATGAAGCAAGTGACATCGTTATCGGACTCCTCGACACTGGTGTTTGGCCCGAAAGCAAGAGCTTCGAAGATACTGGACTGGGACCCATCCCTAGTAGTTGGAAAGGCAAATGTGAATCAGGTGACAATTTCACTACCTTAAATTGCAATAAGAAATTGATAGGAGCCAGATTCTTCTTAAAAGGTTACGAGGCTTCAATGGGTCCCCTTAATGCAACCAACCAATTCAGATCACCACGAGACGCTGATGGCCACGGCACCCACACCGCAAGCACAGCCGCAGGGTCTGCAGTGAAAGGCGCCAGCCTATTCGGCTATGCTTCTGGGACAGCACGTGGGATGGCCTCACGTGCCAGAGTCGCTGTTTACAAGGTTTGTTGGGGAGATACTTGTGCTGTTTCGGATATATTGGCTGCAATGGACGCAGCCATCTCCGACAACGTCAATGTCATTTCTGCATCACTCGGAGGCGGAGCAATCGATTACGATGAAGAAAATCTTGCTATTGGAGCCTTTGCAGCAATGGAGAAAGGGATTGTAGTTTCCTGTGCTGCAGGAAACACGGGTCCTGATAGCTCTTCTCTCCAAAATATAGCACCTTGGATGATCACCGTGGGAGCTGGCACACTAGATCGTGATTTTCCGGTAAATGTTAACCTCGGGAATGGACAAAACTATTCTGGAGTATCAATTTATGATGGTAAATTTTCACGCCATACTTTAGTGCCACTCATATATGCTGGGAATGCCAGTGCAAAAATAGGTGCGGAGTTGTGTGAGACAGATAGCTTGGATCCAAAAAAGGTTAAGGGAAAAATTGTGTTGTGTGATCGTGGAAATAGTTCTAGGGTAGAGAAAGGACTTGTGGTGAAATCTGCCGGCGGTGTGGGCATGGTGTTAGCAAATTCGGAATCCGACGGAGAGGAATTGGTGGCAGATGCCCATCTTTTACCAACAACTGCAGTGGGTTTCAAGGCTGGGAAACTCATCAAGTTGTACTTACAAGATGCTCGAAAACCAACATCTAGGCTTATGTTTGAGGGAACAAAGGTTGGAATTGAGCCGTCGCCAGTTGTTGCAGCATTTAGCTCTCGGGGCCCAAACCCAATAACACCAGAGGTATTGAAGCCTGATTTCATTGCTCCAGGTGTCAACATCTTAGCCGCATTTACGAAGCTTGTGGGTCCCACTAACCTTGACCAAGATGATAGGCGCGTGGACTTCAACATAATTTCAGGTACATCCATGGCATGCCCTCACGCAAGCGGTATAGCAGCTTTGATCAAGTCATTTCATCCAGATTGGAGCCCAGCTGCAATTCGGTCTGCGCTTATGACCACAGCTTATACAACTTACAACAACGGTAAAAAATTGCTAGACAGTGCCACAAATGGCCCGTCAACGCCGTTTGAGGTCGGTGCTGGACATGTGAACCCTGTTGCTGCGCTTAATCCAGGTCTTGTCTATGATTTAGCAGTGGATGATTATCTCAACTTCCTTTGTGCACTAAACTACACACCTGATAGGATTGAGGTTGTGGCGAGGAGAAAGTTCAGGTGCAATGCACACAAGCACTACAGTGTAACCGACTTAAATTACCCTTCATTTGGTGTGGTGTTTAAACCAAAAGTGGGAGGGTCCGGTGCAACGATAGTTAAACACAAACGAACTCTTACTAATGTAGGGGACGCAGGAACATACAAAGTATCAGTTACAGTTGATATTTCATCTGTCAAGATCGCAGTTGAGCCAAATGTGTTGAGCTTCAACAAAAATGAGAAAAAATCATACACAATCACGTTTACGGTTTCAGGTCCACCACCGCCAAGTAATTTTGGTTTTGGACGTTTAGAATGGTCAAATGGAAAGAATGTTGTCGGAAGTCCTATCTCAATTACCTGGGAATCGGGACGTGCATGA 2313 0.4453 MFTMEMFKKPFFATTFVLFMILCDVSLATKDNQKNTYIVHMAKSKMPASFNHHSVWYKSIMKSISNSTEMLYTYDNTIHGLSTRLTLEEARLLKSQTGILKVLPEKIYKPLTTRTPKFLGLDKIADMFPKSNEASDIVIGLLDTGVWPESKSFEDTGLGPIPSSWKGKCESGDNFTTLNCNKKLIGARFFLKGYEASMGPLNATNQFRSPRDADGHGTHTASTAAGSAVKGASLFGYASGTARGMASRARVAVYKVCWGDTCAVSDILAAMDAAISDNVNVISASLGGGAIDYDEENLAIGAFAAMEKGIVVSCAAGNTGPDSSSLQNIAPWMITVGAGTLDRDFPVNVNLGNGQNYSGVSIYDGKFSRHTLVPLIYAGNASAKIGAELCETDSLDPKKVKGKIVLCDRGNSSRVEKGLVVKSAGGVGMVLANSESDGEELVADAHLLPTTAVGFKAGKLIKLYLQDARKPTSRLMFEGTKVGIEPSPVVAAFSSRGPNPITPEVLKPDFIAPGVNILAAFTKLVGPTNLDQDDRRVDFNIISGTSMACPHASGIAALIKSFHPDWSPAAIRSALMTTAYTTYNNGKKLLDSATNGPSTPFEVGAGHVNPVAALNPGLVYDLAVDDYLNFLCALNYTPDRIEVVARRKFRCNAHKHYSVTDLNYPSFGVVFKPKVGGSGATIVKHKRTLTNVGDAGTYKVSVTVDISSVKIAVEPNVLSFNKNEKKSYTITFTVSGPPPPSNFGFGRLEWSNGKNVVGSPISITWESGRA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0434 770 Gene3D - 342 483 - -
Gso11g0434 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Gso11g0434 770 SUPERFAMILY Subtilisin-like 111 618 IPR036852 GO:0004252|GO:0006508
Gso11g0434 770 Pfam Subtilase family 135 590 IPR000209 GO:0006508|GO:0008236
Gso11g0434 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 766 IPR045051 -
Gso11g0434 770 SUPERFAMILY PA domain 374 459 IPR046450 -
Gso11g0434 770 CDD Peptidases_S8_3 108 580 IPR034197 -
Gso11g0434 770 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Gso11g0434 770 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Gso11g0434 770 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Gso11g0434 770 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
Gso11g0434 770 Gene3D - 631 765 - -
Gso11g0434 770 Pfam PA domain 374 460 IPR003137 -
Gso11g0434 770 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Gso11g0434 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 110 IPR037045 -
Gso11g0434 770 Pfam Fibronectin type-III domain 661 763 IPR041469 -
Gso11g0434 770 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 24 766 - -
Gso11g0434 770 Pfam Peptidase inhibitor I9 36 109 IPR010259 -
Gso11g0434 770 CDD PA_subtilisin_like 348 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0434 Gso-Chr11 3818678 3821374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0434 13 765 Subtilisin-like Serine Gene Family AT5G67360 63.937 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0434 - - gmx:100801866 1529.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0434 11 3818678 3821374 Gso5g0889 5 29206809 29209869 PCT
Gso11g0434 11 3818678 3821374 Gso17g1388 17 14666469 14669367 PCT
Gso5g0889 5 29206809 29209869 Gso11g0434 11 3818678 3821374 PCT
Gso17g1388 17 14666469 14669367 Gso11g0434 11 3818678 3821374 PCT