Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0433 ATGGTTTATCTCGCCGTCGCTGGTGCCGGATACAGCTCAGTCGTCGGAATCAATAATCGGAGGCCAGAATTTTTCATATCAATTATACCAAACGGCGCCATTCCAACGCTCTATTTCGTCGCATCTCTGTGTCGGTGCTGCAGAGAACATGGCTTCAGTAGCGCTTCCGAATCCGCTTGGACAGATTTTCCCGTAGAGAACGCGTATGAGCTGTTAGGAGTGTCCGAGACCAGCTCCTTTGACGAGATTAAAGCGTCGTTTCGAAAATTGGCCAAAGAGACTCACCCGGACCTAGCTGAGTCAAAGAACGATTCCACTGCGTCTCGACGATTTGTACAAATTCTGGCTGCCTATGAGATTCTTTCAGATTCTCAAAAGAGAGCCCATTATGACATGTACCTGTTGTCTCAGAAAAAACTTATGCAAAGGCATCCTGGACAGGGTTCAAAATTGCAAATTTACAAATCACAGGCTACTGCGTTCAAGGAGATGGAAGTTGTTGAATGGTTAAAATGGTACAGATTAACTATAAATAATATTTTGGCAGAAAAGAAGATGGTAGTTGGAACTGGCTATTTTGATGTATTTGAGAGAGATTTTTATTCAGCTATTTATGCAGCATACTATGGTCCTGAAATTCAGTCCATGGAGCTTCTTCCTGACTGCTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTAGTTTCAGGACGTGATCTTTTCGGAATGGTTTGCCTAGCTAACAAGGTTCCAGAGATATCAATTACTAACAATGAGAAGTTAACATCTTTTAGATCCTTCCATTCAGGCCTGTGTCAATCTATAACAGATTTGAACGTCCACAAGAATGCAAAAAGATCAGATGATTTTGAAACTCACCGAGGTCACAGCTCTAAAACTTCAAGTATTGTATCAGATGCATATAGACATCTAGAATTGCACATCTCTGGAAGAGTGATTGCTACAGCATCTAGGGCCCTACCCAGATGCTGTTCTGATGAGATGCAGACAGAAGATACTGAAGATCATATTCATGTGTTCCTTAATTTATATGAAGATCCCAAACATATCAGCAGTGATTTTTGGAAAGATTACCTTGCAAATGGTGCAGTTGGAAGAAGAATTCACTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTCTTGCTATGTCTACAATGACAAGGGTACAAAGACCCATGTGATTATGAAGCATAGAACATTGATGGTGAAGCATATGCATTGGTATGAAGTGAGTGAGAAAGTTTCAGTTTGTGAATGTAGATGCACTAGAGCACGCTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTACGTTGAAACATATGGCAAAGATAAGAATGGTCGTACAATGCCATCACAAAGGTTCTGGGATGGCTTGGACTATAGTGAGCAAGCTGACAGAAGACTTCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGGACACTTGATCTTGAATATGCCAAAGCAAGCAAGAAATCATTTAGGAATGTTGTTGGAGCACAAATGTTCCGAATTCTTCATTGGTGCAAGAAACTTGTTCAATAG 1626 0.4176 MVYLAVAGAGYSSVVGINNRRPEFFISIIPNGAIPTLYFVASLCRCCREHGFSSASESAWTDFPVENAYELLGVSETSSFDEIKASFRKLAKETHPDLAESKNDSTASRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMQRHPGQGSKLQIYKSQATAFKEMEVVEWLKWYRLTINNILAEKKMVVGTGYFDVFERDFYSAIYAAYYGPEIQSMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLANKVPEISITNNEKLTSFRSFHSGLCQSITDLNVHKNAKRSDDFETHRGHSSKTSSIVSDAYRHLELHISGRVIATASRALPRCCSDEMQTEDTEDHIHVFLNLYEDPKHISSDFWKDYLANGAVGRRIHLGTISGLGSSPDEGSCYVYNDKGTKTHVIMKHRTLMVKHMHWYEVSEKVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKNGRTMPSQRFWDGLDYSEQADRRLHPAMYLFALAYRTLDLEYAKASKKSFRNVVGAQMFRILHWCKKLVQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0433 541 Pfam DnaJ domain 67 131 IPR001623 -
Gso11g0433 541 CDD DnaJ 67 123 IPR001623 -
Gso11g0433 541 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso11g0433 541 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso11g0433 541 PRINTS DnaJ domain signature 106 126 IPR001623 -
Gso11g0433 541 Gene3D DnaJ domain 58 155 IPR036869 -
Gso11g0433 541 SMART dnaj_3 66 126 IPR001623 -
Gso11g0433 541 ProSiteProfiles dnaJ domain profile. 67 134 IPR001623 -
Gso11g0433 541 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Gso11g0433 541 SUPERFAMILY Chaperone J-domain 65 138 IPR036869 -
Gso11g0433 541 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 48 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0433 Gso-Chr11 3809386 3817150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0433 69 133 C2H2 Transcription Factor Family AT1G74250 44.118 1.22e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0433 - - gmx:100801323 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1646 1 53122043 53129203 Gso11g0433 11 3809386 3817150 GST