Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0421 ATGGGTGAGGAGCTATCACCTACGTTGGTTGTGAGAGAGTTCGACCTGAATAAAGACCGAGAGAGAGTAGAAACCGTTGAAAGGTCATGCGAAGTTGGACCCAGCGGCAAGCTTTCTCTCTTCACCGACATGCTCGGCGACCCAATTTGCAGGGTCCGCCATTCACCTGCTTTTCTCATGCTGGTAGCGGAGATTGGCGAAGAGATAGTAGGAATGATAAGAGGTTGCATAAAAACTGTCACATGCGGGAAAAGATTGTCCAGAAATGGAAAATACAACAACACTAATGTGAAACATGTCCCAGTGTACACCAGAGTCGCATATATACTAGGCCTTCGCGTTGCTCCCAACCAACGTAGAATGGGAATAGGGTTGAAACTAGTGCATAGAATGGAGTCTTGGTTCAGAGATAACGATGCGGAGTATTCTTACATGGCAACGGAAAGAGACAATTTAGCATCCATTAAACTCTTCACCGACAAATGCGGGTATTCAAAATTTCGTAATCCGTCCATTCTTGTCAACCCAGTTTTTGCTCACCGAGCAAGGGTGTCTCCAAGGGTCACAATCATAAGTCTTTCTCCCTCAGACGCCGAGTTTGTCTACCGTCGCCATTTTGCCACAACAGAATATTTCCCGCGCGACATTGACTCAATTCTGAACAACAAACTAAATTTGGGAACATTTTTGGCGCTCCCAAATGGGTCCTACAGTGCCGAGACGTGGCCCGGCCCGGATCTTTTTCTGTCGGACCCACCGCACTCCTGGGCCATGGTCAGTGTGTGGAACACTAAGGAAGTGTTCACGCTCGAGGTGCGTGGTGCGTCGCGCTTGAAACGCACACTTGCAAAGACGTCCCGGTTGGTGGACCGGGCCTTGCCGTGGCTGCGGTTACCGTCGATGCCGGACTTGTTTAGGCCGTTTGGGTTTCAGTTCATGTACGGGCTGGGAGGCGAAGGCCCAGAGGGTGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGTGCACAACCTCGCTATGGAAAAAGGGTGTAGTGTGGTGGCCACGGAAGTGTCCTCAAACGAGCCCTTAAGGTTCGGAATACCCCACTGGAAGATGCTGTCGTGTGAAGATTTATGGTGTATGAAGCGGTTGGGCGAGGATTACAGTGACGGTTCCGTTGGTGACTGGACCAAATCTCAGCCCGGCATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1218 0.5057 MGEELSPTLVVREFDLNKDRERVETVERSCEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEIVGMIRGCIKTVTCGKRLSRNGKYNNTNVKHVPVYTRVAYILGLRVAPNQRRMGIGLKLVHRMESWFRDNDAEYSYMATERDNLASIKLFTDKCGYSKFRNPSILVNPVFAHRARVSPRVTIISLSPSDAEFVYRRHFATTEYFPRDIDSILNNKLNLGTFLALPNGSYSAETWPGPDLFLSDPPHSWAMVSVWNTKEVFTLEVRGASRLKRTLAKTSRLVDRALPWLRLPSMPDLFRPFGFQFMYGLGGEGPEGVKMVKALCGFVHNLAMEKGCSVVATEVSSNEPLRFGIPHWKMLSCEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0421 405 Gene3D - 18 172 - -
Gso11g0421 405 CDD NAT_SF 60 142 - -
Gso11g0421 405 PANTHER N-ACETYLTRANSFERASE 9 404 - -
Gso11g0421 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016407
Gso11g0421 405 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 404 - -
Gso11g0421 405 Pfam Acetyltransferase (GNAT) family 53 164 IPR000182 GO:0016407
Gso11g0421 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 165 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0421 Gso-Chr11 3698231 3700317 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso11g0421 Acetyltransf_1 4.2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0421 - - gmx:100800613 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1658 1 53256808 53258909 Gso11g0421 11 3698231 3700317 GST
Gso11g0421 11 3698231 3700317 Gso5g0906 5 29691225 29693288 PCT
Gso11g0421 11 3698231 3700317 Gso17g1364 17 14088478 14090674 PCT
Gso5g0906 5 29691225 29693288 Gso11g0421 11 3698231 3700317 PCT
Gso17g1364 17 14088478 14090674 Gso11g0421 11 3698231 3700317 PCT