Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0418 ATGGAGAGTTCTGGCACCTTCTTTTCCTTGTCTAGCCTCTTGTGTGATGAAGTAGGAGAAGCTGGCTTCTTTGAAGACCCAGATGAGAACCCTGGCATTTTTTACTCTCTTGATAACCCATGTTTCGTTTTGGAGGATGAAGAGCTATATATTGAATATTTGTTCAAACAAGAAACGGGATTTGGATCCCAGAATCATCACTTGTTTGCCTCTGATGATCATTCTAACAGCAGACACTGGTTACGAAGTGCCCGTGTTGATGCCATTGACTGGATTTTCGATACACAAGCGAAATTTGGGTTCAAAGTTGAGACAGCCTATTTATCAGTGACTTATTTTGATCGGTTTCTATCAGAGCGTTCCATCGATGAATCCAAACCTTGGGCTATTCGGTTATTATCCGTGGCATGTTTATCTCTAGCAGCAAAGATGGAAGAGCAAAATGTGCCTCCTCTATCTGAGTATCCAATAGAAGATTATCGCTTTGAGAATAAAGTAATTAAGAACATGGAACTGATGATTTTGAGTACCTTGGATTGGAAAATGGGATCAGCAACTCCTTTTGCCTATTTGCATTACTTTGTCGGCAAGTTCTGCCCTGGATCCAGACCACAATCAATAATCACTAAAGCCATTGAACATATTGTGGCCATGATCAAAGATGTTAATTTGATGGATCAAAGACCATCTATAATTGCCTCGGCAGCCATATTGGCAGCTCTTGATGCTACATTAACAAGAAAAGCAATGGATCTTCGTATAAGTGTAATCTCATCGTGGGGAAATCTAGAAAGTGGACATGTGTTTTTCTGTTACAATCTAATACAGGAAAAGAGGAAAAGCAAAGTTAAGACACCTTGCTCGAATTTAATGTCTACCAAGTCGAGCTCCACGTGTGTTCTTGAGAACCAATCTGACACTTTTTCGGGAGCTAAGAGAAAACTTAGTTTTGAGGACAGTGAAAATTGTGCGGGACAAAAGCTACATCGGCCTTAG 996 0.4036 MESSGTFFSLSSLLCDEVGEAGFFEDPDENPGIFYSLDNPCFVLEDEELYIEYLFKQETGFGSQNHHLFASDDHSNSRHWLRSARVDAIDWIFDTQAKFGFKVETAYLSVTYFDRFLSERSIDESKPWAIRLLSVACLSLAAKMEEQNVPPLSEYPIEDYRFENKVIKNMELMILSTLDWKMGSATPFAYLHYFVGKFCPGSRPQSIITKAIEHIVAMIKDVNLMDQRPSIIASAAILAALDATLTRKAMDLRISVISSWGNLESGHVFFCYNLIQEKRKSKVKTPCSNLMSTKSSSTCVLENQSDTFSGAKRKLSFEDSENCAGQKLHRP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0418 331 PANTHER CYCLINS 50 314 IPR039361 -
Gso11g0418 331 Gene3D - 184 244 - -
Gso11g0418 331 CDD CYCLIN 85 175 IPR013763 -
Gso11g0418 331 SMART cyclin_7 90 176 IPR013763 -
Gso11g0418 331 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Gso11g0418 331 Pfam Cyclin, N-terminal domain 52 182 IPR006671 -
Gso11g0418 331 Gene3D - 80 183 - -
Gso11g0418 331 PANTHER CYCLIN-D5-1 50 314 - -
Gso11g0418 331 SUPERFAMILY Cyclin-like 38 182 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0418 Gso-Chr11 3653446 3655930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0418 9 265 Core Cell Cycle Gene Families AT4G37630 35.926 1.39e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0418 K18811 - gmx:100798140 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1663 1 53304580 53307021 Gso11g0418 11 3653446 3655930 GST