Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0363 ATGGGAAGCAATGGACTCTGCAACATGTTTTCTTGCTTCAAAGCCTCCTCCAACCACACACCTAACCAAAACCAGCTGGTGTTTGCAGAGACGGAGCCATTGGACGAAACCCTAGGTCATTCCTTTTGCTACGTTAGATCTTCCGCTCGTTTTCTCTCTCCCTCCCATTCCCTCTCTCCCTCCAACTCCCTCCGCTTCTCCCCTTCTCACCGCCCCGATTTCCCCGAAACCGCATTCAAAGCCATTTCCGGCGCCTCCGTCAGCGCCAACAGCTCCGTCCCCAAAACCGTCCTCCCCACCGACGACGACGCCACCGTCAATGGCTTCAAAGGAACTTCTTCTTTTAGCGCCATCCCCCTCCAGCCTGTTCCCAGAGCAGGAGGAGCTGAAGAGAGAGAGAGGCGGGCCTTCTTCCTCTCGGGTCCAATTGAGAGCGGCTCGCTCTCCGGACCCCTCTACGACGCCGTTTCCAGCTCCGCGGGAGTGCCTTTCTCTGCTCCGCTTGGTGGTTCAGTCTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCAGGGTTGAGAAAAGCCTTCCAGAGGAGTCTCTCCGAGAAGAAGCGCCCGGTGGGGAGGAAGGGGAAGACGGAGGCGAAGAACGAGCGCGAAACCGGTAGCAATGTGCAGTGGGCGCTGGGAAAAGCGGGGGAGGATCGTGTGCATGTGGTTGTATCGGAAGAACAGGGTTGGCTGTTCGTGGGGATTTATGACGGTTTCAATGGCCCTGATGCGCCCGAGTTTCTCATGGGTAATCTTTACCGTGCACTTCACAAAGAGCTCCAGGGTTTGTTTTGGGAACTTGAAGAGCCAGAACCAGAGCCGCAGCCGCAGGTGCAGGCAGTAGAGCATAATGAAGCTGAATCCCACAATGACTGGGAGGTTGAACAAGAGTCTAATTCTAATTCTCTCCAAGGATCGGTTAAGAGAGTGACGTTTCATGCGGAGGGGACTGAGAGTAGGAGAAGGAGGTTGTGGGAGTTTCTGGCCGAGGATGATGATGATGCTGAGGACGGCCTTGATCTTTCCGGGTCGGATAGGTTTGCCTTTTCGGTGGATGATGCTCTCAGTGTTAGCAAGGAGGGTTCTGGAGGTAGTAGACGGTGGTTGATTTTGTCTAAGTTGAAGCATGGGTTGTCGAGGCATAAGGAGGGTCATGGGAGAAGGTTGTTTCCGTGGAGCTTGGGCGTGGGGGCGGAGGAGAAGGAGAAGGTTGAGGAGGAAAATCCGGTGGCGGAGGAGGAGGAGGAGGAGGAGGAGAAGGGTCGCGGTGGGAGGAAGAAGAAGGTGGGGCCTGTGGATCATGAGTTGGTTTTGAGGGCGTTGTCTCGGGCGCTTGAGATGACTGAGCTTGCGTATTTGGATATGACGGATAAGCTTATTGATACCAATCCGGAGCTTGCTTTGATGGGGTCATGCCTGTTGGTTGTGTTGATGAGGGATGAGGATGTTTATGTGATGAATGTCGGGGATAGCCGTGCCATTGTGGCACATTATGAGTGTGAAGAGGTTCATGCTAGTAAGGAATCCGGAGGCGGTGCAGACGTTGAGTCAAGCGGGGAGTGCATAGTGGAGGAGAACTTAGCTCGGGATGAAGGTGGTGTGGTGTTGAGGAATGAGGGTCCTGCTCAGGAAAGGAGGTTGGTTGCATTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAGGAAGTTGTTAGGATTAAGAATGAGCACCCTGATGATAACCAATGTATTGTAAATGATAGAGTAAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGAGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGTAGTACTAGAAATGTTTCGAAATGAATATATTGGCACTGCTCCATATATATCCTGCTGTCCTTCATTACGTCACCATAGATTATGCCCAAGAGACCAGTTCTTGATCCTCTCATCTGATGGGTTGTATCAATATCTTAGCAATCAGGAAGTGGTTTCTGAAGTTGAGAGTTTCATGGAAAAGTTTCCAGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTACGTGCAGCTAAAAAAGCTGGAATGGATTTCCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACCGTTATGGTGGTATCACTTGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCCGTGA 2220 0.514 MGSNGLCNMFSCFKASSNHTPNQNQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSLSPSNSLRFSPSHRPDFPETAFKAISGASVSANSSVPKTVLPTDDDATVNGFKGTSSFSAIPLQPVPRAGGAEERERRAFFLSGPIESGSLSGPLYDAVSSSAGVPFSAPLGGSVYVKKKRKKSIAGLRKAFQRSLSEKKRPVGRKGKTEAKNERETGSNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEEPEPEPQPQVQAVEHNEAESHNDWEVEQESNSNSLQGSVKRVTFHAEGTESRRRRLWEFLAEDDDDAEDGLDLSGSDRFAFSVDDALSVSKEGSGGSRRWLILSKLKHGLSRHKEGHGRRLFPWSLGVGAEEKEKVEEENPVAEEEEEEEEKGRGGRKKKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECEEVHASKESGGGADVESSGECIVEENLARDEGGVVLRNEGPAQERRLVALQLSTDHSTSIEEEVVRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSEVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYP* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0363 739 Coils Coil 411 431 - -
Gso11g0363 739 MobiDBLite consensus disorder prediction 410 438 - -
Gso11g0363 739 MobiDBLite consensus disorder prediction 279 321 - -
Gso11g0363 739 CDD PP2Cc 443 727 IPR001932 -
Gso11g0363 739 SMART PP2C_4 211 725 IPR001932 -
Gso11g0363 739 PANTHER PROTEIN PHOSPHATASE 2C 29 19 737 - -
Gso11g0363 739 Pfam Protein phosphatase 2C 552 695 IPR001932 -
Gso11g0363 739 PANTHER PROTEIN PHOSPHATASE 2C 19 737 IPR015655 GO:0004722|GO:0006470
Gso11g0363 739 Gene3D - 187 369 IPR036457 -
Gso11g0363 739 Gene3D - 383 734 IPR036457 -
Gso11g0363 739 SUPERFAMILY PP2C-like 223 728 IPR036457 -
Gso11g0363 739 MobiDBLite consensus disorder prediction 190 217 - -
Gso11g0363 739 MobiDBLite consensus disorder prediction 190 212 - -
Gso11g0363 739 ProSiteProfiles PPM-type phosphatase domain profile. 213 727 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0363 Gso-Chr11 3133155 3138672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0363 1 738 PP2C-type Phosphatase Gene Family AT2G35350 55.907 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0363 - - gmx:100788093 1371.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1711 1 53858828 53864151 Gso11g0363 11 3133155 3138672 GST
Gso11g0363 11 3133155 3138672 Gso5g0972 5 31944469 31949877 PCT
Gso11g0363 11 3133155 3138672 Gso17g1297 17 12904051 12908997 PCT
Gso5g0972 5 31944469 31949877 Gso11g0363 11 3133155 3138672 PCT
Gso17g1297 17 12904051 12908997 Gso11g0363 11 3133155 3138672 PCT