Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0340 TTCGCCCAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGTTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCATGTGGAGTAACGTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGACTTTCGCAAGACAATTCAGAGAGTTCTTAGTGTCCAGTATTCCATTCCGGGCGGTGTTCAAATATCTCCAGAGTGTGGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCAGCAGAGGTAATTTCTATTTCAAATAGCTGGCCTCCTACTGCAATATATAAATTTGACAATACACAACCCTGA 372 0.4194 FAQSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRVLSVQYSIPGGVQISPECGHLISRIFVFDPAEVISISNSWPPTAIYKFDNTQP* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0340 123 PANTHER SERINE/THREONINE KINASE 2 112 - -
Gso11g0340 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0340 123 Pfam Protein kinase domain 7 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0340 123 SUPERFAMILY Protein kinase-like (PK-like) 11 105 IPR011009 -
Gso11g0340 123 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Gso11g0340 123 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0340 Gso-Chr11 2859347 2860798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0340 3 119 CBL-interacting serine-threonine protein kinases AT5G10930 43.307 1.03e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso11g0340 Pkinase 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0340 K14498 - gsj:114375656 255.373