Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g0329 | ATGGAACTTAATTTTAAGTACCAACTTAGCATTATCTGTGTCACACTGCTCTTACCTGCCCTGCGTACCTCTCAGGACTCTTTTACATGCTCCAGAGCAACTTATTATGGTAGCACAGATTGTTATGGAAACCCAAGGGGAGCTTGTGGCTTTGGCGAATATGGAAAAACGGTAAACGATGGCAGTGTAGCAGGCGTGTCTTGGCTATGGAAGAATGGATCTGGCTGTGGAGCATGTTATCAGGTTAGGTGCAAAATACCCCAATTCTGCGATGAGAATGGAGCATACGTGGTGGTGACAGATTATGGCGAGGGAGACAGAACAGACTTCATAATGAGTCCACGTGCCTACTCAAGATTGGGAAGTAACGCAGATGCATCTGCAGAACTATTCAAATACGGTGTAGTGGATGTAGAATACAGAAGGGTCCCCTGTAGATACGGTGGCTATAACCTCTTGGTTAAGGTTCATGAACAGAGCAGAAACCCTCACTACTTAGCCATTGTCATTCTCTATCTTGGTGGAACCTACGACGTAACTGCTGTTGAGTTGTGGCAGGAAGATTGCCAAGAGTGGAGGCGAATGCGCAGGGCATTTGGGACGGTGTTTGATGCTGAGAACCCGCCACGGGGCGACATAAAGTTGAGGTTTCAATTGGGTGGTGATGCACAGCAGTATTGGGTGCAATCCAAGAATGTTATCTCTGGTAATTGGGAAGCTGGAGTTGTTTATGACTCAGAAATTCAGCTTGGTTAA | 756 | 0.463 | MELNFKYQLSIICVTLLLPALRTSQDSFTCSRATYYGSTDCYGNPRGACGFGEYGKTVNDGSVAGVSWLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGSNADASAELFKYGVVDVEYRRVPCRYGGYNLLVKVHEQSRNPHYLAIVILYLGGTYDVTAVELWQEDCQEWRRMRRAFGTVFDAENPPRGDIKLRFQLGGDAQQYWVQSKNVISGNWEAGVVYDSEIQLG* | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g0329 | 251 | PANTHER | EXPANSIN-B1-LIKE PROTEIN | 4 | 250 | - | - | |
Gso11g0329 | 251 | SUPERFAMILY | Barwin-like endoglucanases | 14 | 149 | IPR036908 | - | |
Gso11g0329 | 251 | Gene3D | - | 146 | 247 | IPR036749 | - | |
Gso11g0329 | 251 | Pfam | Expansin C-terminal domain | 154 | 234 | IPR007117 | - | |
Gso11g0329 | 251 | SUPERFAMILY | PHL pollen allergen | 151 | 246 | IPR036749 | - | |
Gso11g0329 | 251 | PRINTS | Expansin/Lol pI family signature | 27 | 42 | IPR007118 | GO:0005576 | |
Gso11g0329 | 251 | PRINTS | Expansin/Lol pI family signature | 66 | 84 | IPR007118 | GO:0005576 | |
Gso11g0329 | 251 | PRINTS | Expansin/Lol pI family signature | 133 | 149 | IPR007118 | GO:0005576 | |
Gso11g0329 | 251 | PRINTS | Expansin/Lol pI family signature | 192 | 206 | IPR007118 | GO:0005576 | |
Gso11g0329 | 251 | PRINTS | Expansin/Lol pI family signature | 232 | 246 | IPR007118 | GO:0005576 | |
Gso11g0329 | 251 | SMART | dpbb_1 | 62 | 140 | IPR007112 | - | |
Gso11g0329 | 251 | PANTHER | EXPANSIN-B3 | 4 | 250 | - | - | |
Gso11g0329 | 251 | Gene3D | - | 19 | 145 | IPR036908 | - | |
Gso11g0329 | 251 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 164 | 246 | IPR007117 | - | |
Gso11g0329 | 251 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 46 | 150 | IPR007112 | - | |
Gso11g0329 | 251 | Pfam | Lytic transglycolase | 63 | 140 | IPR009009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g0329 | Gso-Chr11 | 2764906 | 2767261 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g0329 | 1 | 250 | Expansin Gene Family | AT4G17030 | 58.964 | 2.24e-109 | 313 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g0329 | - | - | gmx:100777427 | 532.332 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso1g1745 | 1 | 54270842 | 54273486 | Gso11g0329 | 11 | 2764906 | 2767261 | GST | |
Gso11g0329 | 11 | 2764906 | 2767261 | Gso5g0557 | 5 | 6434464 | 6436746 | PCT | |
Gso11g0329 | 11 | 2764906 | 2767261 | Gso17g1243 | 17 | 12149773 | 12152416 | PCT | |
Gso5g0557 | 5 | 6434464 | 6436746 | Gso11g0329 | 11 | 2764906 | 2767261 | PCT | |
Gso17g1243 | 17 | 12149773 | 12152416 | Gso11g0329 | 11 | 2764906 | 2767261 | PCT |