Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0317 ATGATGCATGGCTTTCGCCTTCGGGTGAATTTGCTTTTGGATTTCGCCAACTTAATTCCACAAACCTGTTCGTGGTTGCCATCTGGTATGACAAAATACCAGCCAAGACCATTGTGTGGAATGCAAAAGCAAATGAAACCCTTGCAACAGCACCAGCAGGATCACAGAATCCGACCTCAAGGACCAACATGGGGCAACTCAAGTCTTGATCCTAAGGAGTATTACTACAGGGCAACACTTGAATTCAATGGAGTTTTCACACAGTATGCTCATCCAAGAACCAATAATGCCTACCAAGGGTGGACAATTATGCGGTATGTTCCTGGCAACATTTGCACTGCAATATTCAATGAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATGATAGGCCTACTTGCAAATGCCCTTATGGCTATTCAATGGTGGATCCAAGTAATGAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGTGGATGTTAAAGCACAACCAGAAGAACTATATGAAATGCATGAATTCAGAGATTTTAATTTCCCTCTGGGAGATTATGAAAAGAAACAACCTTATTCTCAACAGGAGTGCCGACAATCATGCTTGCACGATTGCATGTGTGCAATGGCCGTTTTAGGCGGTAACACTTGTTGGATGAAGAGATTGCCCCTTTCTAATGGAAGAGTAATCCATGTTAATGATCAACATTTTGTCTATATCAAAACAAGAGTTAGGCGTGACTTTTATGATCCTGGTGCAAACGAGGAACTTCCCCCTGGTGCCGATTCAAAGAAAGAAGATGGAGCTAAGCCAATTCTTTTGGGATCACTTATTGGATCCCTTGTCTTTATCAGTATTAGTATGCTCTTGTGTGCGGTTTCTTGGTTTATTCTCTTGAAGCCGAAACTAACAAGGCTTGTCCCAGCTATTCCTAGTCTTCTGGAAACAAATTTGCATTCCTTTACCTATGAAACATTGGAAAAAGCCACACGGGGTTTCTGTGAGGAAATAGGCAGGGGTTCTTTTGGCATTGTTTACAAAGGCCAACTAGAAGCAGCTTCTTGTAACGTGATTGCCGTCAAGAGATTGGACAGATTAGCACAAGAACGAGAGAAAGAATTTAGGACAGAATTGAGTGCCATTGGTAAAACCTGCCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGACGAGGGAATCAATAGACTATTGGTCTACGAGTTCATGAGCAATGGTACTCTTGCAGACATCCTATTTGGACAATCCAAAGCACCCATCTGGAATACAAGGGTTGGACTTGCTTTGGGGATTGCAAGAGGATTGTTGTACTTACACGAAGAGTGTGACTCTGCCATCATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAGCATTTCAATGCAAAGATCTCTGACTTTGGGTTGGCCAAGTTGTTGTTGTTTGACCAAACTAGAACAAATACGATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAACATTGCAGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTGATGTTGTTGGAAATTATCTGTTGCCGAAGAAATGTGTTGACCATGGAAGCTGAAGAAGAAGAGAAGGTAATTCTGACAGATTGGGCTTATGATTGCTATATAGAAGGGAGAAATATAGATGCTCTGGTAGAGAATGACAAGGAGGCATTGTCTGATAATGGCAGATTGGAAAAATGGATCAAAATAGCATTTTGGTGCATTAATGAGAATCCTGAAGTGAGGCCAACAATGGGAATGGTAATGCTAATGCTAGAAGGCTTTGTTGAAGTCCCTAACCCACCACCGCCTTTTTCCATGCATTCTATATCTTAA 1890 0.4185 MMHGFRLRVNLLLDFANLIPQTCSWLPSGMTKYQPRPLCGMQKQMKPLQQHQQDHRIRPQGPTWGNSSLDPKEYYYRATLEFNGVFTQYAHPRTNNAYQGWTIMRYVPGNICTAIFNEYGSGSCGYNSYCSMENDRPTCKCPYGYSMVDPSNEFGGCQPNFTLACGVDVKAQPEELYEMHEFRDFNFPLGDYEKKQPYSQQECRQSCLHDCMCAMAVLGGNTCWMKRLPLSNGRVIHVNDQHFVYIKTRVRRDFYDPGANEELPPGADSKKEDGAKPILLGSLIGSLVFISISMLLCAVSWFILLKPKLTRLVPAIPSLLETNLHSFTYETLEKATRGFCEEIGRGSFGIVYKGQLEAASCNVIAVKRLDRLAQEREKEFRTELSAIGKTCHKNLVRLIGFCDEGINRLLVYEFMSNGTLADILFGQSKAPIWNTRVGLALGIARGLLYLHEECDSAIIHCDIKPQNILIDEHFNAKISDFGLAKLLLFDQTRTNTMIRGTRGYVAPEWFKNIAVTVKVDVYSFGVMLLEIICCRRNVLTMEAEEEEKVILTDWAYDCYIEGRNIDALVENDKEALSDNGRLEKWIKIAFWCINENPEVRPTMGMVMLMLEGFVEVPNPPPPFSMHSIS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0317 629 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Gso11g0317 629 Pfam Protein kinase domain 341 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0317 629 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0317 629 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 53 628 - -
Gso11g0317 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Gso11g0317 629 Pfam PAN-like domain 181 227 IPR003609 -
Gso11g0317 629 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Gso11g0317 629 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Gso11g0317 629 CDD STKc_IRAK 343 613 - -
Gso11g0317 629 ProSitePatterns Protein kinases ATP-binding region signature. 343 367 IPR017441 GO:0005524
Gso11g0317 629 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 53 628 - -
Gso11g0317 629 ProSiteProfiles Protein kinase domain profile. 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0317 Gso-Chr11 2671479 2673790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0317 290 621 Receptor kinase-like Gene Family AT5G55830 38.462 1.65e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso11g0317 Pkinase 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0317 - - gsj:114376498 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1759 1 54392971 54396050 Gso11g0317 11 2671479 2673790 GST