Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0312 ATGTTACCATTATCCCCCATCAGACGCTACTGCTTTATGACCCGAAGCTTGTTGAAGCCTGCTAGAAACCAAGTCTTTAAATGCTTTTTGCAAAATTCTTCTAGTCTAGGCGGCTCAAGTTTCTTAACAAATACTAGATTCATATTTTATTCTTGGTCTTCGTCCCCCACCAAACAGTCCCAAAAGATGGATGCATTCATCTTCCTCTTCCTCTTGTGTGTTTTCTGCTTCCAAAGTAAGGTGACCTATTCAACAAAGTGCGGAGATGCAGGCCCTGAAATCCACTATCCATATCAGATAAAAGGTCAGCAGCAACAACAGAATGATGCCCTTTCTGGTTTTGAGCTTCTTTGCAAAGACAACCTCACCACTATCCACTTTCCATCTTATGGGAATTTGGTAGTTAAGTCCATTTCCTATGACACCAAAAACATTCACCTCCTTGACCCCAACAACTGTGCCCATCGTGTCTTTCTCAACCTCAACCTCTCCCTCACACCGTTCCACTATTTTTATGTTCTGAAAAACTACACGTACCTCAATTGCTCCACCACCCTTCCACGTCCTTTCGTGGAGGTTCCGTGTTTAAGTGCTTCGAGCTATCATGTGTACACAGTTGACCCTGCTGTGCCTGTGCCGGGTTCATGTGAAGGAGTCAAAACCGTAGCCATTCCTTTTGCGTATAGCCCTTATCTCTCAGACAAAAGTCTTGGTCTTAGATTAACATGGCACTTGCGTGAACTTGAAGGCAACGAAGCAGTAAACCTGAATAGAAGTTCCCACAAATCGCGTAATATAGTTATAGGCTTTAGCATCTGTGTTTTCGTGATGGCCATGCTATTGCTTATAAGCATAAAGGTTCGTGGTGCCACGAGGAATCTCCATCAGAAAGAAGAACAGTTATTGCAGAGCTAG 915 0.435 MLPLSPIRRYCFMTRSLLKPARNQVFKCFLQNSSSLGGSSFLTNTRFIFYSWSSSPTKQSQKMDAFIFLFLLCVFCFQSKVTYSTKCGDAGPEIHYPYQIKGQQQQQNDALSGFELLCKDNLTTIHFPSYGNLVVKSISYDTKNIHLLDPNNCAHRVFLNLNLSLTPFHYFYVLKNYTYLNCSTTLPRPFVEVPCLSASSYHVYTVDPAVPVPGSCEGVKTVAIPFAYSPYLSDKSLGLRLTWHLRELEGNEAVNLNRSSHKSRNIVIGFSICVFVMAMLLLISIKVRGATRNLHQKEEQLLQS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0312 304 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 63 301 - -
Gso11g0312 304 Pfam Wall-associated receptor kinase galacturonan-binding 86 149 IPR025287 GO:0030247
Gso11g0312 304 PANTHER PROTEIN, PUTATIVE-RELATED 63 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0312 Gso-Chr11 2633183 2634654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0312 78 263 C3H Transcription Factor Family AT2G25410 30.102 3.55e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0312 - - gmx:100818574 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1762 1 54435823 54437877 Gso11g0312 11 2633183 2634654 GST