Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0287 ATGGCTTCTTCTTCACTCTTGGTGTCACTGCAAGTAGCGCTTGTGGTTTTCACTTGCATATTCCATGCAGCAACAGTGACATGTGACCGTAGCTTCAAAATATTCTCTTCTATGAACAACTCCTCCAAGAGTAGCCACCATTGGATTGGACCCATCGGCCACCGCAAAATCACCGTTGATGTTAACGGTGGCGGGCACTACCGGTCCGTCCAAGACGCCGTCAATGCCGTCCCCGACAACAACAGAAAGAATGTCCTTGTTCAAATCAACGCCGGGTGCTACAAAGAAAAGGTAGTGGTGCCCGTGACGAAGCCGTACATAACATTTCAGGGCGCGGGTAAGGAAGTGACGGTGATAGAATGGCATGATCGAGCCAGTGACCCCGGTCCCAGCGGACAGCAATTGCGTACTTACAGAACCGCTTCTGTTACAGTTTTTGCCACCTATTTTTCTGCCAGAAACATCAGCTTCAAGAACACAGCACCTGCACCAATGCCGGGGATGCAGGGAAGGCAAGCGGTGGCGTTTCGAATATCCGGCGACAAAGCATACTTCTCCGGCTGCGGTTTCTACGGTGCACAAGACACCCTGTGCGACGATGCAGGCAGACATTACTTCAAGGAATGCTACATTGAGGGATCAATCGACTTTATTTTTGGGAATGGCAGGTCAATGTACAAGGATTGCGAGCTGCACTCAATAGCGACGAGGTTTGGTTCCATAGCGGCCCACGATAGGAAGGAGGCAGAGGAGAAGACAGGGTTCGCATTCGTAGGATGCAAGGTGACAGGAACGGGTCCGTTATATGTGGGGCGAGCAATGGGACAGTATTCCAGAATTGTTTACTCTTACACATATTTCGATGATATCGTTGCACATGGCGGTTGGGATGATTGGGACCATGCAGACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGCTGGGGACCAGGAGCAGAGGCTGTACGTGGAGTCTCATGGGCCCGAGACTTAAATTTCGAATCTGCTCATCCATTTATCAGGAAGAGTTTCGTCAATGGGAGACACTGGATCGCGCCATCTGATGCTTAA 1077 0.5023 MASSSLLVSLQVALVVFTCIFHAATVTCDRSFKIFSSMNNSSKSSHHWIGPIGHRKITVDVNGGGHYRSVQDAVNAVPDNNRKNVLVQINAGCYKEKVVVPVTKPYITFQGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFATYFSARNISFKNTAPAPMPGMQGRQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKEAEEKTGFAFVGCKVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSWARDLNFESAHPFIRKSFVNGRHWIAPSDA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0287 358 Pfam Pectinesterase 57 349 IPR000070 GO:0030599|GO:0042545
Gso11g0287 358 PANTHER PECTINESTERASE 68-RELATED 14 357 - -
Gso11g0287 358 Gene3D - 53 357 IPR012334 -
Gso11g0287 358 ProSitePatterns Pectinesterase signature 2. 211 220 IPR033131 -
Gso11g0287 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 357 - -
Gso11g0287 358 SUPERFAMILY Pectin lyase-like 55 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0287 Gso-Chr11 2415448 2418804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0287 3 358 Carbohydrate Esterase AT5G47500 72.452 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0287 - - gmx:100810031 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0287 11 2415448 2418804 Gso17g1197 17 11521009 11524578 PCT