Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0276 ATGTCGGCTTACAAAGACCAGGATACCCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACTACTCTATTGCTTGATCCCAAAGCATTTAAGGACACAATAGATTTGTTCGTTGAGCGGTACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATTTTTGGTCCTCCCATTGCGCTGGCTATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAACCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACAGGTGGAACACTCTGTGCAGCTATGGACTTGTTAGAACGTGTGGGAGCAGAAGTGGTGGAGTGTGCATGTGTAATTGAATTACCAGAATTGAAGGGTCGTGAACGTTTGAACGGGAAGCCCTTGTACGTGTTGGTTGAATATGTGGAGATATGA 555 0.4306 MSAYKDQDTRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEPGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYVEI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0276 184 CDD PRTases_typeI 48 180 IPR000836 -
Gso11g0276 184 Gene3D - 2 182 IPR029057 -
Gso11g0276 184 TIGRFAM apt: adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso11g0276 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 181 - -
Gso11g0276 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso11g0276 184 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Gso11g0276 184 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Gso11g0276 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0276 Gso-Chr11 2291843 2296787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0276 1 180 PRT Gene Family AT1G27450 75.000 8.92e-97 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0276 K00759 - gmx:100306411 367.081