Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0266 ATGGGGAGGCAACCTTGCTGTGACAAACTTGGGGTGAAGAAAGGTCCATGGACAGCCGAGGAAGACAAAAAACTCATAAACTTCATTTTCACCAATGGCCAGTGCTGTTGGCGTGCTGTTCCCAAGCTTGCTGGGCTTCGGCGTTGTGGTAAGAGTTGTCGTCTTCGTTGGACTAATTATCTAAGGCCTGACTTGAAGAGAGGGCTCCTCACACAGGCTGAAGAGCAGCTTGTTATCGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCCAGGTTACCAGGAAGGACAGACAACGAGATTAAAAATCACTGGAACACCCACATTAAGAAAAAGCTCCTTAAGATGGGTATTGATCCTCTTACTCACGAACCTCTTAACAAACAAGTCTCATCCAAAGATAGTTCATCCTCTGAAGAGAATTTGCCACAAGCTGACAACACTCATCAGGTTAAGGAAAGTGATAGGGTTCTCAACTCAGAAGAAAATTCTAGCTCATCAGCAGCTGAAAATTCTTCTGGTGAAGAATCCCTTTTAGTGGAAAGCGATGTGTCTCTAATGAACACCATGTGGCTGGATGAAACTCCTCTAATGGACACATTATGGGACAATACACCTAAACTAGAGAATGCAAATAGTAACATGGGCTTGCCAATATGGGAGGATAATTGTGCTTGGTTGTTGGACTGCCAGGACTTTGGTATTCATGATTTTGGTTTCAATTGTTTCAGCGAGATCGAATCAAATGTACTGCAATCTATAGGCATGGACAGAAAAGGGCTTTAG 795 0.4428 MGRQPCCDKLGVKKGPWTAEEDKKLINFIFTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPLTHEPLNKQVSSKDSSSSEENLPQADNTHQVKESDRVLNSEENSSSSAAENSSGEESLLVESDVSLMNTMWLDETPLMDTLWDNTPKLENANSNMGLPIWEDNCAWLLDCQDFGIHDFGFNCFSEIESNVLQSIGMDRKGL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0266 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 249 - -
Gso11g0266 264 SMART sant 13 63 IPR001005 -
Gso11g0266 264 SMART sant 66 114 IPR001005 -
Gso11g0266 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gso11g0266 264 Gene3D - 12 67 - -
Gso11g0266 264 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gso11g0266 264 CDD SANT 16 61 IPR001005 -
Gso11g0266 264 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gso11g0266 264 MobiDBLite consensus disorder prediction 127 180 - -
Gso11g0266 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gso11g0266 264 PANTHER PROTEIN ODORANT1-LIKE 2 249 - -
Gso11g0266 264 CDD SANT 71 112 IPR001005 -
Gso11g0266 264 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gso11g0266 264 MobiDBLite consensus disorder prediction 163 180 - -
Gso11g0266 264 Gene3D - 70 161 - -
Gso11g0266 264 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gso11g0266 264 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Gso11g0266 264 MobiDBLite consensus disorder prediction 128 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0266 Gso-Chr11 2217013 2219398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0266 1 243 MYB Transcription Factor Family AT4G22680 58.647 3.81e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso11g0266 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0266 K09422 - gmx:100809301 533.487