Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0263 ATGAAAGTTCACCACTCCGTCCAACTCCTTCTTTCTCTATTTCTACTGCTTGCATTTCACGTTCCTCATATGGCTGTTGGCACTGCGGAGCTTAGAGCTCTGATGGAGTTGAAGTCCTCTCTGGATCCAGAGGGCAAGATCCTTGGGTCATGGATAAGTGATGGTGATCCATGCAGTGGCTTCTTCGAAGGGGTTGCGTGCAACGACCACCGCAAAGTGGCCAACATCTCCTTGCAGGGAAAGGGTCTTTCTGGTTGGTTATCTCCAGCACTGGCTGAACTCAAATGCTTGTCGGGTTTATACTTGCACTACAACAACCTTTCTGGTGAGATACCCCCACACATTTCAAATCTCACTGAACTGCTTGATCTCTATCTTGACGTTAATACTTTATCTGGAACTATTCCTCCTGAGATCGCCAACATGGCTAGTCTCCAAGTGTTGCAGTTGGGAGATAACCAGTTGGTGGGGACCATACCTACACAGATGAGTTCCTTAAAGCAGCTTAGTACTCTTGCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTGGGGAACTTGGAGAAGCTAAGCAGGCTTAATTTGAGCTTCAACAACTTTAGTGGTACTGTTCCAGCAACACTAGCACATATTGAACATTTGGAAGTTCTAGATATTCAGAACAATTCTTTGTCGGGAATTGTTCCTTCGGCATTGAAGAGACTTGGGGAAGGATTCCAAGGTGCAAACAACCCGGGTTTGTGTGGAGTTGGGTTTTCTACTTTGAGAGCCTGCAACAAAGATCAAGATTTAAATGTTAACCATATTGATACCTCAGACGGAGACCAACCCAAAAATAGTAATTCTTCAAAGGCGCTCCCGGAGCCTGCTTATGTTCAGTTGCATTGTGGCCAGACCCATTGTTCGAAATCAAGAAGGTTTCCTCAAACTGTCATCACAGCAGGTGTTGTAATCGTTACTCTTACATTCATATGTGCTGGATTTTTGACATTCTTCAGATACCGCCGTCAAAAGCAGAGGATTAGTAATACATTAAGTTCTTCTTCAGAAGGAAAAGTTAGCCTTGACCAGCCTAAAGAGTTCTACACAAAAAGTCCATCTGCACTTGTTAATATTGACTATTATAGTGGATGGGATCAATTGTCTAATGGTCAAAATGCTGATGCTGGTGGACTATCCCATGAGTATCTAAATCAGTTCAGGTTTAATGTGGATGAGGTTGAATCTGCAACACATTACTTCTCGGAAGCCAATTTACTTAATAGGAGCAAATTCGCAGCAGGTTATAAAGGAGTTCTCAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAGTGTGACATGCTGCAAAACAGAGGAAGCTGAATTTGTAAAGGGCTTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGTTTTTGTTGCTCAAGGAGTAGAGGTGAATGTTTCCTTATCTATGACTTTGCCACCATGGGTAACCTGTCTCAATATCTCGACATAGAAGATGGAAGTAGCCATGTGCTCGAGTGGTCCAAAAGAGTCTCTATCATCAAGGGCATTGCAAACGGCATTGGATATCTTCATAGCAATGAAGAAAGCAAACCTACAATAGTTCACCAGAATATTTCCGTGGAAAATGTTCTCCTAGATTATCAGTTTAACCCATTGATCAGGGATGCTGGACTACCTATGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTAAAAGTTAGTGCCGCAATGGGATACTTAGCTCCTGAATACATCACTACAGGCCGCTTTACTGAGAAAAGTGACATATACGCATTTGGAGTAATCATTCTTCAAGTTCTATCTGGCAAGACCACAATAGGTAGTTCAATACGGACAGCAGTTGAGTCTTTCAGATTTGATGATTCTGTTGACACAAATCTCAAGGGAATATATTCTAAATCTGAAGCAGCAACACTTTCAAAGCTTGCAATACAGTGCACTAATGAGCTTCCTGACGAAAGACCAACCATGGTGGATGTGATTCAGGAGCTGAGTGTGTTATCTGCTCATTTATAA 2070 0.4217 MKVHHSVQLLLSLFLLLAFHVPHMAVGTAELRALMELKSSLDPEGKILGSWISDGDPCSGFFEGVACNDHRKVANISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGEIPPHISNLTELLDLYLDVNTLSGTIPPEIANMASLQVLQLGDNQLVGTIPTQMSSLKQLSTLALQYNKLTGQIPLSLGNLEKLSRLNLSFNNFSGTVPATLAHIEHLEVLDIQNNSLSGIVPSALKRLGEGFQGANNPGLCGVGFSTLRACNKDQDLNVNHIDTSDGDQPKNSNSSKALPEPAYVQLHCGQTHCSKSRRFPQTVITAGVVIVTLTFICAGFLTFFRYRRQKQRISNTLSSSSEGKVSLDQPKEFYTKSPSALVNIDYYSGWDQLSNGQNADAGGLSHEYLNQFRFNVDEVESATHYFSEANLLNRSKFAAGYKGVLRDGSLVAIRSISVTCCKTEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATMGNLSQYLDIEDGSSHVLEWSKRVSIIKGIANGIGYLHSNEESKPTIVHQNISVENVLLDYQFNPLIRDAGLPMLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVLSGKTTIGSSIRTAVESFRFDDSVDTNLKGIYSKSEAATLSKLAIQCTNELPDERPTMVDVIQELSVLSAHL* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0263 689 SUPERFAMILY Protein kinase-like (PK-like) 396 685 IPR011009 -
Gso11g0263 689 SUPERFAMILY L domain-like 30 236 - -
Gso11g0263 689 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 686 - -
Gso11g0263 689 Gene3D Transferase(Phosphotransferase) domain 1 497 687 - -
Gso11g0263 689 Gene3D Ribonuclease Inhibitor 28 177 IPR032675 -
Gso11g0263 689 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Gso11g0263 689 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 686 - -
Gso11g0263 689 Gene3D Ribonuclease Inhibitor 178 247 IPR032675 -
Gso11g0263 689 ProSiteProfiles Protein kinase domain profile. 417 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0263 689 Pfam Protein tyrosine and serine/threonine kinase 425 682 IPR001245 GO:0004672|GO:0006468
Gso11g0263 689 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Gso11g0263 689 SMART LRR_typ_2 142 166 IPR003591 -
Gso11g0263 689 SMART LRR_typ_2 190 213 IPR003591 -
Gso11g0263 689 SMART LRR_typ_2 94 118 IPR003591 -
Gso11g0263 689 SMART LRR_typ_2 214 237 IPR003591 -
Gso11g0263 689 Gene3D Phosphorylase Kinase; domain 1 383 495 - -
Gso11g0263 689 Pfam Leucine Rich Repeat 216 238 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0263 Gso-Chr11 2194401 2198029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0263 9 530 Miscellaneous Gene Families AT4G22730 57.197 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gso11g0263 PK_Tyr_Ser-Thr 7.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0263 - - gmx:100797612 1357.04