Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0243 ATGGAACTTGCATTGCCTCTTGCTCTTGCTCTTATTTTCGTGCTAATTAGTATATACCCAACTTCAGCACACCAAAATACAGAATTCGTGAATGCAAAAGAGGAACTCGATGTTCCAAGCAGCTTATTGACTTACATTGTTCGTGTTAAAAAGCCTCAAAGTCAGGGTGATGATTCTCTTCAGTATAAGGACTTGCATAGTTGGTACCATTCACTTCTACCAGCTAGTACAAAAACTGATCAGAACCAACAACGCATTACTTTCTCATACCGCAACGTGGTGGATGGATTCGCCGTGAAATTGAACCCAGAAGAAGCCAAAGCTCTTCAAGAGAAAGAGGAGGTTGTGTCAGCCCGTCCCGAAAGGACATTTTCTTTGCACACAACTCACACTCCAAGCTTCTTGGGGTTGCAACAAGGACTAGGACTATGGACCAATTCCAATTTTGGCAAAGGCATCATAATTGGAATTCTGGACACAGGCATAACCCCTGACCACCTTTCCTTCAATGATGAAGGAATGCCACTTCCACCGGCAAAATGGAGTGGCCACTGTGAATTCACAGGGGAGAAAACTTGCAACAACAAGCTCATTGGTGCAAGAAATTTCGTGAAAAACCCAAACTCAACCCTTCCACTGGATGATGTTGGTCATGGGACCCACACAGCCAGCACAGCCGCAGGAAGATTTGTCCAGGGTGCTAGTGTCTTTGGCAATGCTAAGGGTACTGCAGTTGGCATGGCACCTGATGCGCACTTAGCAATTTACAAGGTTTGTGACCTCTTTGGTTGTTCCGAAAGTGCAATACTAGCTGGAATGGACACTGCCATTCAAGATGGTGTAGATATACTTTCTCTCTCACTTGGAGGACCCCCTGCTCCTTTCTTTGATGACCCAATTGCACTTGGTGCATTCAGTGCAATTCAAAAGGGTATTTTTGTTAGTTGTTCAGCTGCTAACGCTGGCCCTTTTTATTCCTCTTTGTCTAATGAGGCTCCGTGGATTCTCACTGTTGGTGCCAGCACCATTGACAGAAGAATAGTAGCAGCAGCAAAACTTGGCAACGGGGAAGCATTTAACGGGGAATCGGTGTTCCAACCCAACAACTTCACGTCCACGTTACTACCACTTGTCTATGCAGGTGCAAATGGAAATGACTCTTCTACCTTTTGTGCCCCGGGATCCTTACAGAGCATGGATGTGAAGGGAAAGGTAGTGTTGTGTGAGATAGGTGGATTCGTTAGAAGAGTAGACAAAGGACAAGAAGTTAAGAGCGCTGGTGGTGCAGCCATGATCCTCATGAACTCACCAATTGAAGACTTCAATCCCTTTGCTGATGTTCACGTTCTTCCTGCTACACACGTGAGTTACAAGGCTGGGTTAGCCATCAAAAATTACATAAACTCAACATCAACGCCAACAGCTACAATTTTGTTCCAAGGAACCGTTATTGGAAATCCACATGCACCCGCAGTTACTTCCTTTTCCTCAAGAGGTCCAAGTTTGGAAAGCCCCGGAATTCTGAAGCCAGACATCATTGGACCGGGACAGAACATTCTAGCTGCATGGCCTTTGTCATTGGACAACAATCTTCCTCCATTCAACATCATTTCTGGCACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCTGCTTTGCTGAAAAACTCTCATCCAGATTGGTCTCCAGCTGCAATAAAATCAGCAATCATGACAAGTGCTAACACTGTGAATCTTGGAGGGAAGCCTATATTGGAACAAAGGCTTCTACCAGCTGATGTGTTTGCCACTGGTGCTGGACATGTTAACCCTTTGAAGGCCAATGATCCAGGCCTTGTTTATGATCTTCAACCAACTGATTACATTCCTTATTTGTGTGGTTTGAACTACACAGACAAAGAAGTTGGATTCATCTTGAACCAGAAAGTGAAGTGCTTGGAGGTGAAAAGCATAGCGGAAGCACAACTCAATTATCCCTCGTTTTCTATTCGGTTGGGGTCTAGTTCACAGTTCTACACCAGAACACTCACAAATGTTGGACCCGCCAACATAACCTACTCTGTGGAAGTTGATGCGCCTTCGGCTGTAAGCATAAGCATAAGCCCTGCAGAGATAGCATTCACGGAGGTGAAGCAGAAGGTTTCATACTCGGTTGGGTTTTATCCTGAAGGGAAAAACAATAGAAGGAAACACCCGTTTGCTCAGGGATCTATCAAGTGGGTATCTAGCAACGGCAAGTATTCTGTTAGCATCCCTATAGCTGTCATCTTCCTGTGA 2277 0.451 MELALPLALALIFVLISIYPTSAHQNTEFVNAKEELDVPSSLLTYIVRVKKPQSQGDDSLQYKDLHSWYHSLLPASTKTDQNQQRITFSYRNVVDGFAVKLNPEEAKALQEKEEVVSARPERTFSLHTTHTPSFLGLQQGLGLWTNSNFGKGIIIGILDTGITPDHLSFNDEGMPLPPAKWSGHCEFTGEKTCNNKLIGARNFVKNPNSTLPLDDVGHGTHTASTAAGRFVQGASVFGNAKGTAVGMAPDAHLAIYKVCDLFGCSESAILAGMDTAIQDGVDILSLSLGGPPAPFFDDPIALGAFSAIQKGIFVSCSAANAGPFYSSLSNEAPWILTVGASTIDRRIVAAAKLGNGEAFNGESVFQPNNFTSTLLPLVYAGANGNDSSTFCAPGSLQSMDVKGKVVLCEIGGFVRRVDKGQEVKSAGGAAMILMNSPIEDFNPFADVHVLPATHVSYKAGLAIKNYINSTSTPTATILFQGTVIGNPHAPAVTSFSSRGPSLESPGILKPDIIGPGQNILAAWPLSLDNNLPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTSANTVNLGGKPILEQRLLPADVFATGAGHVNPLKANDPGLVYDLQPTDYIPYLCGLNYTDKEVGFILNQKVKCLEVKSIAEAQLNYPSFSIRLGSSSQFYTRTLTNVGPANITYSVEVDAPSAVSISISPAEIAFTEVKQKVSYSVGFYPEGKNNRRKHPFAQGSIKWVSSNGKYSVSIPIAVIFL* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0243 758 CDD PA_subtilisin_like 352 477 - -
Gso11g0243 758 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 757 - -
Gso11g0243 758 Gene3D - 344 485 - -
Gso11g0243 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 757 IPR045051 -
Gso11g0243 758 Pfam Fibronectin type-III domain 655 755 IPR041469 -
Gso11g0243 758 Gene3D - 625 757 - -
Gso11g0243 758 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Gso11g0243 758 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Gso11g0243 758 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Gso11g0243 758 Pfam PA domain 376 463 IPR003137 -
Gso11g0243 758 CDD Peptidases_S8_3 126 575 IPR034197 -
Gso11g0243 758 Pfam Peptidase inhibitor I9 44 127 IPR010259 -
Gso11g0243 758 SUPERFAMILY Subtilisin-like 126 612 IPR036852 GO:0004252|GO:0006508
Gso11g0243 758 Pfam Subtilase family 150 577 IPR000209 GO:0006508|GO:0008236
Gso11g0243 758 Gene3D Peptidase S8/S53 domain 152 621 IPR036852 GO:0004252|GO:0006508
Gso11g0243 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 127 IPR037045 -
Gso11g0243 758 SUPERFAMILY PA domain 376 477 IPR046450 -
Gso11g0243 758 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 155 166 IPR023827 -
Gso11g0243 758 ProSiteProfiles Serine proteases, subtilase domain profile. 123 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0243 Gso-Chr11 2034011 2036495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0243 44 755 Subtilisin-like Serine Gene Family AT1G04110 44.726 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0243 - - gmx:100799902 1499.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0432 5 4562289 4564974 Gso11g0243 11 2034011 2036495 PCT
Gso17g1128 17 10763951 10766538 Gso11g0243 11 2034011 2036495 PCT