Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0199 ATGTCATCATGGTGGGAAAAGTCTTCATCCAAAGATGTAAAGAGGAAAGAAAAAAGGAAAAGTATTATTGATACAATACAAAGGAAATTAAATAAATCAAGAGGGTCTAGGAGAAATCATAGTCACACTAACTCAGAGAAGGGAACCACATCCCTTGTACCTACAACATCACCATCACCCTCAACACATGTTTCCCGCCTACAAAGTTTTGCGGAAAGACCTCTTGCTCAGCCACTCCCACTCCCAGGGACGCACTGCTCCTCCACCAATCGAGCAAATTCTGGAACTAGTGTAACATCAAAACCACAAAGCACCTGGGGCTTGAAATCATCTCTATATTTCCCCTTACCAAAACCTGGTTGTGTTTTTAACAGGGGAGAACCTACAGATGCCGAGGAAGATATTGCCACTGCATCAATTTCTAGTGGCAGCTCTATTGATAGTGATGACCAATGTGACTCACATTTCCTTAGTCCTCTGGCATCTGATTCTGAAAATGGAAACCAAGCTACCGTTCACAATACCGTCAGTGTGGTTCACAAGGATCAACCACCCATTACTATCCAAAAAAACTCAAGAGTATCCTCAAAACCAGCTCCTCAACTGTGTAATCATCAACTTTTATATAACACACCCAAAGGGGCTTCTTTGCATCTGCCGAATCCGCAAATAGCTTCTTCAGGTGGTTTGTGGAGTGCTCCAGACAGTTCAATGTCAAGTCCTTCTAGAAGTCCACTGAGAATGTTTGGTTCCGAGCAAGTTTTGAATTCTGGATTCTGTACAGGAAAGCTATATCCAGATTTAGCTACTAGGCACTGTTCTAGTCCTGGTTCAGGCCATAATTCAGTTGGTGGGGATCTGACAGGGCATAATTCTCCGATACCCAGTCCTGGAATGAAAAGTCCTGGTTTCAGTTCCAGGATACACAGTGGTGCTGTCACCCCTCTTCATCCACGTGCTGGAAGTGCTGCATTAGAATCGCCCACAAGACGCCCTGATGACGTGAAACAGACTCACCGATTACCTCTTCCTCCAATAACAATACCTAATCATTGTCCATTTTCTCCAACATATTCTGCAACTACTACTCCTTCAGCGCCTCGTAGTCCCAGCATAGCAGAAAATCTAACATATCCTGGCTCGCGCTGGAAAAAGGGGCAACTGCTTGGAAGGGGGACATTTGGGCATGTATATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTTTTTTCAGATGATGCTAAATCAAGGGAAAGTGCTCAACAACTTGGCCAAGAAATTGCATTGCTAAGTCACCTGCGGCATCCAAATATAGTCCAATATTATGGATCTGAGACGGTAGATGATAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGTTGCTTCAACAGTATGGCCAGCTTAGTGAAATTGTTATTCGTAATTATACTCGGCAAATTCTGTTAGGTCTTGCTTATTTACATGCTAAAAACACTGTTCATAGAGACATTAAAGCCGCAAACATATTGGTGGATCCTAATGGGAGGGTAAAATTGGCAGATTTTGGCATGGCAAAGCATATAAGTGGGCAATCCTGTCCATTATCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTGATAAAGAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTCCACCGTTTTCGAGATGGCTACTACAAAACCTCCTTGGAGCCAATACGAAGGGGTTGCGGCTATGTTTAAGATTGGAAACAGCAAGGACCTTCCTGCAATGCCAGATCATCTATCAGAAGATGGAAAAGATTTTATCAGGCAATGCTTGCAAAGGAATCCAGTGCATCGTCCCTCTGCTGCTCAACTTCTGCTGCATCCATTTGTTAAAAAAGCCACACTGGGAAGACCTGTTCTGTCTGCTGATCCTTTAGAAGCAAAACCTGATTTTGTAAATACTATGAGATCTCTGGCTATTGGACCTGCAAAACATAATTTAGGCTTAGTTTCAGAAGCAGCTGGTACATATCTGTCTAGAAGCTTGAGAACTGGCTCAGGATCAAGTGAAGCCCATACACCAAGGAACATTTCATATCCTGTGTCTCCTACTGGGAACCCACTTTTGCCTCCTAGGTTACTGCATGTGAGTGGAAGGCTGTCTCCATCTAGTCCTCACACTGCATCTGGCTCATCTACACCGCTCACTGGTGGCATTGGTGCAGTCCCTTTTCATCAAACAAAGCAGCCAATGTTCTCACATGAAGGTATCAGTGTAATACAAAGGCCTCAAAGTTATCAGGAGCCAATGCATGACCCACTTTGGGGGATTCTGAAAAGCACTCTTGCTTGCCCGGATATAGTTTCGTCCAATAATGATGCTCTTGGAAACCATAATAGGAGGGTTGGCCAGGGACTCCCAAGAGATTTTTATGATGGGAAGTCATATTTAGCGGATCGTGTATCGCAACAGCTGTTAAACGATCATGTAAGAAAATTTCATTCCTAG 2535 0.4335 MSSWWEKSSSKDVKRKEKRKSIIDTIQRKLNKSRGSRRNHSHTNSEKGTTSLVPTTSPSPSTHVSRLQSFAERPLAQPLPLPGTHCSSTNRANSGTSVTSKPQSTWGLKSSLYFPLPKPGCVFNRGEPTDAEEDIATASISSGSSIDSDDQCDSHFLSPLASDSENGNQATVHNTVSVVHKDQPPITIQKNSRVSSKPAPQLCNHQLLYNTPKGASLHLPNPQIASSGGLWSAPDSSMSSPSRSPLRMFGSEQVLNSGFCTGKLYPDLATRHCSSPGSGHNSVGGDLTGHNSPIPSPGMKSPGFSSRIHSGAVTPLHPRAGSAALESPTRRPDDVKQTHRLPLPPITIPNHCPFSPTYSATTTPSAPRSPSIAENLTYPGSRWKKGQLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSRESAQQLGQEIALLSHLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQQYGQLSEIVIRNYTRQILLGLAYLHAKNTVHRDIKAANILVDPNGRVKLADFGMAKHISGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGSTVFEMATTKPPWSQYEGVAAMFKIGNSKDLPAMPDHLSEDGKDFIRQCLQRNPVHRPSAAQLLLHPFVKKATLGRPVLSADPLEAKPDFVNTMRSLAIGPAKHNLGLVSEAAGTYLSRSLRTGSGSSEAHTPRNISYPVSPTGNPLLPPRLLHVSGRLSPSSPHTASGSSTPLTGGIGAVPFHQTKQPMFSHEGISVIQRPQSYQEPMHDPLWGILKSTLACPDIVSSNNDALGNHNRRVGQGLPRDFYDGKSYLADRVSQQLLNDHVRKFHS* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0199 844 MobiDBLite consensus disorder prediction 274 347 - -
Gso11g0199 844 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 779 - -
Gso11g0199 844 Pfam Protein kinase domain 384 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0199 844 SUPERFAMILY Protein kinase-like (PK-like) 381 720 IPR011009 -
Gso11g0199 844 MobiDBLite consensus disorder prediction 274 299 - -
Gso11g0199 844 MobiDBLite consensus disorder prediction 1 105 - -
Gso11g0199 844 MobiDBLite consensus disorder prediction 8 31 - -
Gso11g0199 844 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 779 - -
Gso11g0199 844 MobiDBLite consensus disorder prediction 82 105 - -
Gso11g0199 844 Gene3D Transferase(Phosphotransferase) domain 1 381 657 - -
Gso11g0199 844 MobiDBLite consensus disorder prediction 690 747 - -
Gso11g0199 844 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Gso11g0199 844 MobiDBLite consensus disorder prediction 690 712 - -
Gso11g0199 844 MobiDBLite consensus disorder prediction 45 68 - -
Gso11g0199 844 CDD STKc_MEKK1_plant 382 639 - -
Gso11g0199 844 ProSiteProfiles Protein kinase domain profile. 383 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0199 844 MobiDBLite consensus disorder prediction 729 745 - -
Gso11g0199 844 SMART serkin_6 383 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0199 Gso-Chr11 1674520 1682409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0199 4 840 MAP Kinase Kinase Kinase AT1G63700 56.152 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso11g0199 Pkinase 7.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0199 K20717 - gmx:100787920 1649.8