Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g0196 | ATGTCTTCTGATCTCTATACTTTTGACATTTCTTACCAAAGACATTCAAGCCCAGACAACATGGTCTCCTATGATGGAAATGGAAACTTTGTATTTTTCTCTGACCCTCACTCTTTCCCTTTCCTCACTGGCTCACCAATTGATGATGTTGTTCAAGGGAATTTTAACACTTCTCTTGACCCTTTTTCCTCTTCTTTCTGCTCCTTTTCTCCTCAGGAAAACCCTGTGCAACCTCTGTCTAATATAAAGGGTGAGTTTAGAAGTTTCTCTTATTTGCATGGCTCCGAAGTGACAAGTAAGGAATGCCAAATGGGTGTGGATTATACCTACAATCAGCACTTTATTTCTCAAACTTGTCATGGTTCTGAAAGTGCATCAAAGTTAATTCAAAGGAGCTTCAGCTGTACCTCTTTTGATGAGAAGCCTCGTTTCCCCTTTGAACCTCACCCTGACACTCTCATGGATTTTCAATGGCATGCTTTGAACTCCCCTGAAAACACTTTCTTCGCAGCATCAATGAGGAGAGTGTGCAGTACAGGAGATTTGCAGAACATGAAAGCAGCAGATATGTCTCAAACGGAGAGCCCCTTGTTGGAGGAAGGAAACTTCAAAGTAAGGCGTTATAGTGCCGAAGAAAGAAAAGAAAAAATCTCTAAATACAGAGCTAAGAGAAGCCAGAGGAAGTTCAATAAGACTATTAAGTATGCATGCCGAAAGACACTAGCCGACAATAGAACCCGCATACGTGGCAGATTCGCACGCAACGACGAAATCAGAGAGATTCCGAAAGCACCTTGTTCAAGTTCAACCACAGAAGAATATGAAGACGAGTTCTGGGTTGAATTCATTGAAGGATTAAATGAGGAGGTCAACGGTTAG | 879 | 0.4175 | MSSDLYTFDISYQRHSSPDNMVSYDGNGNFVFFSDPHSFPFLTGSPIDDVVQGNFNTSLDPFSSSFCSFSPQENPVQPLSNIKGEFRSFSYLHGSEVTSKECQMGVDYTYNQHFISQTCHGSESASKLIQRSFSCTSFDEKPRFPFEPHPDTLMDFQWHALNSPENTFFAASMRRVCSTGDLQNMKAADMSQTESPLLEEGNFKVRRYSAEERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDEIREIPKAPCSSSTTEEYEDEFWVEFIEGLNEEVNG* | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g0196 | 292 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 4 | 32 | 290 | IPR045281 | GO:0009909 | |
Gso11g0196 | 292 | Pfam | CCT motif | 213 | 255 | IPR010402 | GO:0005515 | |
Gso11g0196 | 292 | PANTHER | CCT MOTIF FAMILY PROTEIN | 32 | 290 | - | - | |
Gso11g0196 | 292 | ProSiteProfiles | CCT domain profile. | 213 | 255 | IPR010402 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g0196 | Gso-Chr11 | 1642440 | 1644682 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g0196 | 199 | 260 | C2C2-CO-like Transcription Factor Family | AT5G24930 | 41.935 | 1.11e-09 | 56.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Gso11g0196 | CCT | 1.7e-16 | CL0281 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g0196 | - | - | gmx:100786853 | 591.652 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g0196 | 11 | 1642440 | 1644682 | Gso5g1785 | 5 | 41104827 | 41107253 | PCT | |
Gso11g0196 | 11 | 1642440 | 1644682 | Gso8g0143 | 8 | 1323952 | 1326223 | PCT |