Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0172 ATGGCTTCCAATGCTACATCTGGAAATGCTTGCCCGCAGCCAATGAAAGCCACATCAAACGGTGCGTTTCAGGGTGACAATCCACTTGATTTCGCGCTTCCCCTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCTCAAGGGGACTGGCATATCTTCTTAAACCTTTCAGGCAACCTAGAGTTATTGCAGAGATCATTGGAGGAATAATTCTCGGGCCATCAGTGCTTGGACGGAACAAAAGCTATATGCAGAAAGTTTTCCCACCCAGGAGTCTTCCAGTATTAGACACTTTAGCAAACATTGGCCTTATATTCTTTCTATTCTTAGCAGGCCTGGAGTTAGATCTTAAATCTCTGCGTCAATCTGGAAATCGAGTCCTCGCTATTGCTATGGCTGGAATAAGCCTACCCTTTGTAATAGGAATTGGTACGTCATTTGTTCTAAAACAAACAATTGCCAAAGGTTCAGATAATGCCGCATTCCTTGTATTTATGGGTGTTGCTCTGTCCATAACTGCATTTCCCGTATTAGCCCGTATTTTGGCCGAGTTGAAACTTCTAACCACAAATGTTGGCAAAACAGCTATGTCAGCTGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTTGCTGTTGCCTTGTCAGGTCATGATCGATCTCCACTCGTGTCATTGTGGGTCTTCTTAGCTGGGTGTGGTTTTGTCATTTGCGCAATCCTTATTGTCCCTCCAATTTTCAAATGGATGAGCCAACGATGCCATGAAGGTGAACCAGTTGAAGAGGTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTCACAGATGCTATAGGAATCCATGCCATGTTTGGTGCTTTTGTTGTCGGAATTTTGGTTCCAAATGATGGACCGTTTGCCAGTGCTCTAGTGGAGAAAGTAGAGGATCTAGTGTCTGGTCTATTTCTTCCTCTTTATTTTGTGTCAAGTGGATTGAAGACTAATGTAGCCACCATCAAGGGGGCGCAATCATGGGGTCTTCTGGCTTTTGTTATATTTACAGCTTCGTTTGGGAAGATTCTTGGGACTCTTGTTGTTTCACTTTTCTGTAAAGTTCCTTTTAATGAGGCTTTGGTGTTGGGGTTCTTGATGAATTGCAAGGGCTTGGTTGAATTAATAGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTTATGGCTGTCTTTACTACCTTCATCACCACTCCTCTCGTGACTGCTGTGTATAAGCCTGCAAGAAAGGGAAAAATAACAAATTACAAATATAGAACAATTGGAAGGAAAAATGCAAATAGCCAACTGAGGATTCTTGCCTGCTTCCATGGTGCAAGAAATATTCCATCGATGATAAATTTGATTGAGGCTTCAAGAGGAATACAGAAGCGTGATGCACTTTGTGTGTATGCAATGCACCTTAAAGAATTCTCTGAGAGGTCCTCATCAATGTTAATGGTACACAAGGCAAGAAGAAATGGGTTGCCATTCTGGAACAAAGGCCATCATGCAGATTCTAACCATGTTATTGTGGCATTTGAGGCTTACAGGCAACTAAGCCAAGTGTCTATTCGGCCAATGATTGCAATCTCATCTATGAACAACATACATGAAGACATTTGTGCAACCGCTGAGAGGAAGGGAGCCGCAGTCATTATTCTTCCATTTCATAAGCATCAAAGATTGGATGGTTCACTAAATATCACCAGAAATGATTTTCGATGGGTTAACAAAAGGGTACTTGAGCATGCACCATGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGTGGTACATCCCATGTCTCCGCAAGTAATGTTTCTTATCGTGTTACAGTGCTTTTCTTTGGTGGTGGTGATGATCATGAAGCCCTTGCTTATGGAGCTCGTATGGCTGAGCACCCTGGCATCAGATTGCTGGTTATTCGCTTTGTAGGGGAACCAATGAATGGAGAGATTGTAAGAGTTGATGTGGGTGACTCCACTAGCACCAAATTAATCTCACAGGATGAGGAATTCCTCGATGAAATTAAGACGAAAATAGCCAATGATGACTCCATCATCTATGAAGAGAAAGTAGTAAAAGATGGTGCAGAAACAGTTGCTATTATCCGTGAGTTGAAAAGCTGCAATCTGTTTCTTGTGGGTTCAAGGCCAGCCAGTGAAGTTGCCAGTGCTATGAAAAGAAGTGAATGCCCTGAACTTGGACCTGTTGGTGGTTTGTTGGCATCACAAGATTACCCCACAACTGCATCCGTTTTGGTGATGCAACAATTTGAAAATGGGGCGCCAATAAATTTTACTATCTCGGACTCAGAAATGGAGGAACACGTACCTGATCGGGATTCAGAATCTGCTTAA 2418 0.4264 MASNATSGNACPQPMKATSNGAFQGDNPLDFALPLAILQICLVLVVSRGLAYLLKPFRQPRVIAEIIGGIILGPSVLGRNKSYMQKVFPPRSLPVLDTLANIGLIFFLFLAGLELDLKSLRQSGNRVLAIAMAGISLPFVIGIGTSFVLKQTIAKGSDNAAFLVFMGVALSITAFPVLARILAELKLLTTNVGKTAMSAAAINDIAAWILLALAVALSGHDRSPLVSLWVFLAGCGFVICAILIVPPIFKWMSQRCHEGEPVEEVYICATLAAVLAAGFVTDAIGIHAMFGAFVVGILVPNDGPFASALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGAQSWGLLAFVIFTASFGKILGTLVVSLFCKVPFNEALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVTAVYKPARKGKITNYKYRTIGRKNANSQLRILACFHGARNIPSMINLIEASRGIQKRDALCVYAMHLKEFSERSSSMLMVHKARRNGLPFWNKGHHADSNHVIVAFEAYRQLSQVSIRPMIAISSMNNIHEDICATAERKGAAVIILPFHKHQRLDGSLNITRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDHEALAYGARMAEHPGIRLLVIRFVGEPMNGEIVRVDVGDSTSTKLISQDEEFLDEIKTKIANDDSIIYEEKVVKDGAETVAIIRELKSCNLFLVGSRPASEVASAMKRSECPELGPVGGLLASQDYPTTASVLVMQQFENGAPINFTISDSEMEEHVPDRDSESA* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0172 805 Gene3D - 35 439 IPR038770 -
Gso11g0172 805 Gene3D - 506 753 - -
Gso11g0172 805 PANTHER CATION/H + ANTIPORTER 7 791 - -
Gso11g0172 805 Pfam Sodium/hydrogen exchanger family 42 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso11g0172 805 PANTHER CATION/H(+) ANTIPORTER 18 7 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0172 Gso-Chr11 1417361 1421653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0172 1 803 Antiporter Super Family AT5G41610 68.020 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0172 - - gmx:100781515 1533.08