Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0165 ATGGAACTTATTTTGTGCTTCGTCTACTTGGTTTCTCTCATGCTCTTCCAAGCACAAGCAAATGCAATCTCTGACAAGCAAGCATTGCTTGATTTCGTGGAAAAGTTGGCTCCTTCAAGATCCCTGAATTGGAACGCAAGCTCTTCCCCATGTACCTCCTGGACCGGTGTAACCTGTAACGGAGACAAGTCACGAGTTATAGCCATTCACTTGCCAGCATTCGGGTTTCACGGAACCATCCCTCCCAACACAATAAGCCGCGTCACGGGGTTGCGAACACTCAGCCTCAGATCCAACTTCATAAATGGTCACTTCCCTTGTGATTTTTCCAATCTCAAAAACCTTTCCTTTCTCTATCTTCAGTTCAACAACTTCACGGGTCCCTTACCTGACTTCTCTGCTTGGAGGAACCTCTCTGTTGTCAACTTGTCCAATAATTTCTTCACCGGCACCATTCCTCTCTCTCTCTCCAATTTGACTCAGCTAACTTCCATGAATCTCTCCAACAACTCCCTCTCCGGGGAAATACCTCTCTCTCTTCAGAGGTTTCCCAAGTCAGCATTCGTTGGAAACAATGTCTCCCTTCAAACCTCCTCTCCTGTAGCTCCATTTTCTAAATCTGCAAAACACAGCGAAACGACCGTGTTTTGTGTTATTGTTGCTGCTTCTCTTATTGGTCTCGCAGCATTTGTTGCATTTATCTTTCTATGCTGGTCGAGAAAGAAGAAGAATGGGGATTCCTTTGCTCGGAAGTTGCAGAAGGGAGATATGTCTCCGGAAAAAGTAGTGTCGAGGGACCTGGATGCAAATAATAAAATTGTTTTCTTTGAGGGGTGTAGTTATGCTTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTAGGGAAGGGGACGTTTGGTGCTGCGTATAAGGCTGCGCTGGAGGATGCTACCACTGTTGTTGTGAAGAGGTTGAAGGAGGTGGCTGTTGGAAAGAAGGATTTTGAGCAGCTTATGGAGGTTGTTGGGAATCTTAAACATGAGAATGTGGTTGAGCTGAAGGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAGGGGAGTCTCTCGGCTTTCTTGCATGGTAAAAGAGGAGAGGATAGGGTGCCTCTAGATTGGGATACTCGGATGAAAATTGCTTTGGGTGCTGCACGAGGCCTTGCTTGTATACATTGTGAGAATGGTGGGAAACTTGTGCATGGCAATATCAGATCCTCAAATATCTTTCTCAATAGTAAACAGTATGGTTGTGTATCTGATCTTGGCCTGGCAACCATAATGAGTTCAGTTGCCATACCAATCTCGCGAGCCGCTGGTTACAGAGCACCTGAAGTCACAGACACGAGGAAAGCGACACAACCATCTGATGTTTACAGCTTTGGTGTGGTGTTATTAGAGCTTCTCACTGGGAAATCCCCTGTCTACACAACTGGTGCCGATGAGATTGTGCACTTGGTGAGATAG 1506 0.4568 MELILCFVYLVSLMLFQAQANAISDKQALLDFVEKLAPSRSLNWNASSSPCTSWTGVTCNGDKSRVIAIHLPAFGFHGTIPPNTISRVTGLRTLSLRSNFINGHFPCDFSNLKNLSFLYLQFNNFTGPLPDFSAWRNLSVVNLSNNFFTGTIPLSLSNLTQLTSMNLSNNSLSGEIPLSLQRFPKSAFVGNNVSLQTSSPVAPFSKSAKHSETTVFCVIVAASLIGLAAFVAFIFLCWSRKKKNGDSFARKLQKGDMSPEKVVSRDLDANNKIVFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKKDFEQLMEVVGNLKHENVVELKGYYYSKDEKLMVYDYYTQGSLSAFLHGKRGEDRVPLDWDTRMKIALGAARGLACIHCENGGKLVHGNIRSSNIFLNSKQYGCVSDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQPSDVYSFGVVLLELLTGKSPVYTTGADEIVHLVR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0165 501 SUPERFAMILY L domain-like 38 186 - -
Gso11g0165 501 Gene3D Phosphorylase Kinase; domain 1 258 364 - -
Gso11g0165 501 Gene3D Ribonuclease Inhibitor 22 200 IPR032675 -
Gso11g0165 501 ProSitePatterns Protein kinases ATP-binding region signature. 296 327 IPR017441 GO:0005524
Gso11g0165 501 Gene3D Transferase(Phosphotransferase) domain 1 366 501 - -
Gso11g0165 501 ProSiteProfiles Protein kinase domain profile. 290 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0165 501 PANTHER PROTEIN, PUTATIVE-RELATED 15 501 - -
Gso11g0165 501 PANTHER OS05G0588300 PROTEIN 15 501 - -
Gso11g0165 501 Pfam Leucine Rich Repeat 162 182 IPR001611 GO:0005515
Gso11g0165 501 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Gso11g0165 501 SUPERFAMILY Protein kinase-like (PK-like) 294 499 IPR011009 -
Gso11g0165 501 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Gso11g0165 501 Pfam Protein tyrosine and serine/threonine kinase 294 499 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0165 Gso-Chr11 1366713 1370484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0165 14 501 Receptor kinase-like Gene Family AT4G23740 59.887 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso11g0165 PK_Tyr_Ser-Thr 7.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0165 - - gmx:100780435 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0165 11 1366713 1370484 Gso5g1819 5 41470704 41474951 PCT
Gso11g0165 11 1366713 1370484 Gso8g0177 8 1694002 1698473 PCT