Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0163 ATGGAACAGTTCCGGCATATAGGAGAGGTGGTTGGGAGTCTGAAAGCGCTTATGGTTTTGCGCGATGAAATCCAAATAAACCAACGACAATGCTGTTTGATCCTGGACATCTTCGGTTTGGCGATGGAGACGATCGCGGAGGAGATAAGGCAGAACCTGAAGCTGGAGGAGCGTAACACGAAATGGAAGGCTCTGGAATTTCCGCTGCGTGAGCTATGCAGGGTTTTGAAGGAGGGAGAGCTTTACATAAGGCAGTGTTTGGATTCCAAGGACTGGTTGGGGAAAGCCCTCACCCTTTCTCACAACAGAGAATGCGTCGAATTCCACATCCACAATCTTCTCTGTTATTTCCCCGCCGTCATCGAGGCCATTGAGAACGCTGGACTGGTGTCAGGCTCGGATCCGGACGAGAAGGAGAAGAAGAAAGTGATGCTGGCTCGGAAATACGACTTGGAATGGAACGACCCCAAGCTGTTCCAGTGGAGGTTCGGGAAACAGTATTTGGTCCCCCGCGATATTTGCAAGCAATTGGAACACGCGTGGAGGGAGGACAGGTGGAGTCTCGTGGAAGCAATCAAGGACAAGAAGAAGAAGAAGAAGAAGAAGAGCGAGCAGCGCCTAGCGGATATGTTGTTGAAGAAACTTCTTAATGGGTCAGAGATTGTCCCAATTGAGGTTCTTATTGGGTCGAATGATTACCAAGTTAGACGCAGGTTGGGTCGCGGTGGTAAGGAGTTTAAGGAAATCCAATGGCTCGGACAGTGCTTCGCGTTGAGACACTTTCAGGGTGAGAGACAAGCGCACGAGGCCGAGGTTTCCACTCTGCTCTCATTATCTCACCCCAACATATTGCAATACCTCTGCGGGTTTTACGACGAGGAGAAAAAGGAGTATTCCCTTGTGATGGAGTTGATGAACAAGGATTTGTGGACTTACATGAAGGATAATTGTGGTCCCAGGAGACAGATTCTCTTCTCTGTCCCCGTTGTGGTGGACCTCATGCTTCAGATGGCCAGAGGCATGGAGTACTTACATTCCAAAAAGATTTTTCACGGACACCTTAACCCTTGTAATATTTTGCTCAAGCCAAGGAACTCCCAAGAGGGTTATTTTCAAGCAAAGGTTTCAGGGTTTGGCTTGTCTTCTGTGAACAATATTAACATTAACAGTGATGCTCATGAGGACCACGACCCTTTAACTTGGTTTGCTCCCGAAGTTCTGACGGAGTTAGAACAAACGCCAGATGCTTATGCTAATTCTACTTGTACCTCGGAGAAAGCTGATGCTTATAGCTTTGGGATGATATGCTTTGAGTTGTTGACAGGGAAAGTGCCTTTTGAAGATAACCATCTTCGAGGAGCCAGAACCAGCCAAAACATTAAAGCGGGTGAAAGGCCTTTGTTTCCTTACCGTTCCCCAAAATACCTTGTGAGTTTGATCAAAAAGTGTTGGCAAACAGACCCTGCTCAGCGTCCTACATTCTCCTCCATTTGTAGGATTTTGCGTTACACGAAAAAGTTCCTTGCCATGAACACGGAGTCCCATATCATGAACCCAGAACTCAACAACCAGATTGAGCTTCAGGCCCCTCCTGTGGACTGCTGCGACATAGAAACGACGTTCCTAAAGGGCTTTTCAATGGAGAGGACGACATCTGGTGTGTTCGCTGTGTCGCAGATACCCTACGAAATGTTTGCTTATAAAGTTGCCGAGAAATTGAAAATCAATCCCAACAACAGCAGTAAGTGCTGCGAGCACCAAAAGGAGGAGCCCTCTTCGTGTAGGAGTGAAAGTGATGAGCAAAGTGATAACGCATCCACTGTGGAAGATCCGTTCCCACTACTAACCTCTCCGACATCAGTTTGCGGTGACGCACGGTCTGTTTGCTCGGAAGCCCCGTTCAGGAAAACTGTTAGAATGAAGAAACCAACACCCGTAAAGGCCAACAAAGAACAAGGAACTCCAAAATTGTTAGTGACAAAGTCATTACCATCATCTTTATCTAATCGAGTTTTAAGGACTACAAAGGTGAATCAGTCGTCATTGGCACCAAGCACTTTGAGCCCTGCAGCTGCAGATAGAAGACGACCTCCCGTAGTCTCTGACAAAGGGAATCAATCACCACTAGTTTCGAGCTCAGTCAGGAGAAAAAAATATGACGGAAGCTTGTCGGATTCTAAGGGCAGTTTAAGGCTGGAAAAAAGGGATCAGCCACCATTAGCATTACAAGGTAGTTCAAAGATGAAAAAGTCACAACTGAAGTTGAACCCTTCTTTGAGCCCAAGAAGACTACGACGTTCCAACACTGAGACCAATTTGAAGGGGCTCACGCCGACCCATACGTTATGCTCTCAGAGAATATGCACAAACAGAAGTCGTAGTTATCATGTCTCAGATTTGGATAACGGTTTAAAGATGACAAAAGGTAGGTTGTCATCGTTGGCATTAAGCCCCTATATGAGAAGAAAGAAAACAAGCGGCCATGTCTCTGACTCCGAGAGCAGTTTTGTGAAGAAAAGAGGAAGTCTTTCACCATTCGCATTGAGCCCTTTGAGTCCTTATGTGAGGACAACCTGTGGCCATGTCTCGGATTAA 2595 0.4667 MEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFGLAMETIAEEIRQNLKLEERNTKWKALEFPLRELCRVLKEGELYIRQCLDSKDWLGKALTLSHNRECVEFHIHNLLCYFPAVIEAIENAGLVSGSDPDEKEKKKVMLARKYDLEWNDPKLFQWRFGKQYLVPRDICKQLEHAWREDRWSLVEAIKDKKKKKKKKSEQRLADMLLKKLLNGSEIVPIEVLIGSNDYQVRRRLGRGGKEFKEIQWLGQCFALRHFQGERQAHEAEVSTLLSLSHPNILQYLCGFYDEEKKEYSLVMELMNKDLWTYMKDNCGPRRQILFSVPVVVDLMLQMARGMEYLHSKKIFHGHLNPCNILLKPRNSQEGYFQAKVSGFGLSSVNNININSDAHEDHDPLTWFAPEVLTELEQTPDAYANSTCTSEKADAYSFGMICFELLTGKVPFEDNHLRGARTSQNIKAGERPLFPYRSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKFLAMNTESHIMNPELNNQIELQAPPVDCCDIETTFLKGFSMERTTSGVFAVSQIPYEMFAYKVAEKLKINPNNSSKCCEHQKEEPSSCRSESDEQSDNASTVEDPFPLLTSPTSVCGDARSVCSEAPFRKTVRMKKPTPVKANKEQGTPKLLVTKSLPSSLSNRVLRTTKVNQSSLAPSTLSPAAADRRRPPVVSDKGNQSPLVSSSVRRKKYDGSLSDSKGSLRLEKRDQPPLALQGSSKMKKSQLKLNPSLSPRRLRRSNTETNLKGLTPTHTLCSQRICTNRSRSYHVSDLDNGLKMTKGRLSSLALSPYMRRKKTSGHVSDSESSFVKKRGSLSPFALSPLSPYVRTTCGHVSD* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0163 864 MobiDBLite consensus disorder prediction 580 619 - -
Gso11g0163 864 MobiDBLite consensus disorder prediction 640 777 - -
Gso11g0163 864 Gene3D Transferase(Phosphotransferase) domain 1 224 528 - -
Gso11g0163 864 SUPERFAMILY Protein kinase-like (PK-like) 230 501 IPR011009 -
Gso11g0163 864 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 711 - -
Gso11g0163 864 MobiDBLite consensus disorder prediction 744 777 - -
Gso11g0163 864 ProSiteProfiles Protein kinase domain profile. 233 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g0163 864 PANTHER SERINE-THREONINE PROTEIN KINASE 1 711 - -
Gso11g0163 864 MobiDBLite consensus disorder prediction 655 687 - -
Gso11g0163 864 MobiDBLite consensus disorder prediction 598 619 - -
Gso11g0163 864 Pfam Protein tyrosine and serine/threonine kinase 264 500 IPR001245 GO:0004672|GO:0006468
Gso11g0163 864 Coils Coil 193 213 - -
Gso11g0163 864 MobiDBLite consensus disorder prediction 718 734 - -
Gso11g0163 864 MobiDBLite consensus disorder prediction 583 597 - -
Gso11g0163 864 Pfam Protein of unknown function (DUF1221) 21 230 IPR010632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0163 Gso-Chr11 1338863 1342951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0163 266 501 MAP Kinase Kinase Kinase AT1G62400 31.224 4.92e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Gso11g0163 PK_Tyr_Ser-Thr 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0163 - - gmx:100778844 1713.35