Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0156 ATGGAGGGAATGCGAGACACAAAGTCACAGCTTGAAATCCAAGACCAAGAGGGTACTAATATTGGGTCCTCTTTGTCAAAGCTCATATTAGCAAGTGGCAGTGGCACAAACACCCTTGACTCAATTTTCTCCAATTGCCCACAAACAACAAATGGCAGCACTAGTAGCAACTCCGTGTTAGATGATTTAGAACCCTTTAGGTCTTCGGGGTGTGAGTCTTTAGGCTCTTCCGTGTACCTCCGCCAAAGGGACATCCTCCAAAAATTCTACCAAGAAAGCCGAGGAAATGGGAACAATAACGGGTCTTATAATATTCCCAGATCCTTGGCAAATACGTCTATAAACTCTGTTTGCAGGAGTTCTTCGTTGAGTTGTTATTCGTTGACGAAGCCTTGTAAGAAAAAGCTGTACAGGGGAGTGAGGCAGAGGCACTGGGGAAAATGGGTGGCGGAAATTAGACTCCCTCAGAACAGGATGAGAGTGTGGTTGGGAACCTACGACACCGCCGAAGCTGCTGCCTACGCCTACGACCGCGCCGCCTATAAGCTCCGTGGAGAGTACGCGCGCTTGAACTTTCCCAATCTCAAGGACCCCACCAAGCTGGGATTCGGTGACTCTGCGAGATTGAACGCCTTGAAGTCCTCCGTAGACGCCAAAATTCAAGCCATATGCCAGAAGGTCAAAAAGGAGAGAGCCAAAAAGAATGCCACCAAGAAGAAGCTTCATGATAGTTCGGGCAGCACTGACCCTAATGGCGGGCAGAAGATCAACTCCTCTTCTTGCTCTTCGTCATCGCTGTCGCAGCCGTTGTCGCCACCTTCGATTTTTTACGATAATTGGGCGAACGATTTGTTCTCGCCGGCCTCGGTTTCGACGGAGTGTCAATCAATGGAAACAGAGGAGTTGTTCGAAGGTTGTTCTCTGGCTAGATTGCCTTCCTTCGATCCCGAGTTGATTTGGGAGGTTCTGGCCGTTTAA 978 0.4908 MEGMRDTKSQLEIQDQEGTNIGSSLSKLILASGSGTNTLDSIFSNCPQTTNGSTSSNSVLDDLEPFRSSGCESLGSSVYLRQRDILQKFYQESRGNGNNNGSYNIPRSLANTSINSVCRSSSLSCYSLTKPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKKERAKKNATKKKLHDSSGSTDPNGGQKINSSSCSSSSLSQPLSPPSIFYDNWANDLFSPASVSTECQSMETEELFEGCSLARLPSFDPELIWEVLAV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0156 325 MobiDBLite consensus disorder prediction 231 268 - -
Gso11g0156 325 Pfam AP2 domain 137 186 IPR001471 GO:0003700|GO:0006355
Gso11g0156 325 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 287 324 - -
Gso11g0156 325 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 267 - -
Gso11g0156 325 CDD AP2 135 195 IPR001471 GO:0003700|GO:0006355
Gso11g0156 325 Gene3D AP2/ERF domain 136 194 IPR036955 GO:0003700|GO:0006355
Gso11g0156 325 PRINTS Ethylene responsive element binding protein signature 137 148 IPR001471 GO:0003700|GO:0006355
Gso11g0156 325 PRINTS Ethylene responsive element binding protein signature 159 175 IPR001471 GO:0003700|GO:0006355
Gso11g0156 325 ProSiteProfiles AP2/ERF domain profile. 136 193 IPR001471 GO:0003700|GO:0006355
Gso11g0156 325 SUPERFAMILY DNA-binding domain 136 193 IPR016177 GO:0003677
Gso11g0156 325 SMART rav1_2 136 199 IPR001471 GO:0003700|GO:0006355
Gso11g0156 325 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 287 324 - -
Gso11g0156 325 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 14 267 - -
Gso11g0156 325 MobiDBLite consensus disorder prediction 246 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0156 Gso-Chr11 1280791 1282302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0156 19 324 AP2-EREBP Transcription Factor Family AT1G64380 46.328 2.60e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso11g0156 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0156 - - gmx:100815913 591.267