Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0142 ATGAGTGCCGCCACTTCCTCCACCCTCTCCACCGTCACCGATGCCAATCTTCACTCCAGATTTCATTCTCGTCTTGTTCCATTCACTCATCATTTCTCACTTTCTCAACCCAAACGGATTTCTTCAATCAGATGCCAATCAATTAATACCGATAAGAAGAAATCAAGTAGAAATCTGCTGGACAATGCAAGTAACCTCCTCACGGACTTATTAAGTGGTGGAAGTATAGGGTCTATGCCCATAGCTGAAGGTGCAGTCTCAGATCTGCTTGGTCGACCTCTCTTTTTCTCACTGTATGATTGGTTCTTGGAGCATGGTGCGGTGTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCTAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTTGAACCAATAATGGGCAAAGGACTCATACCAGCAGACCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCGGCTTTCCATAACTCATACTTGGAAGCTATGGTTAAAATATTCACAACTTGTTCAGAAAGAACAATATTGAAGTTTAATAAGCTTCTTGAAGGAGAGGGTTATGATGGACCTGACTCAATTGAATTGGATCTTGAGGCAGAGTTTTCTAGTTTGGCTCTTGATATTATTGGGCTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCAGTTATTAAGGCAGTCTATGGCACTCTTTTTGAAGCTGAACACAGATCCACTTTCTACATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTCCCAAGGCAAAGAAAGTTTCAGGATGACCTAAAGGTCATCAATACTTGTCTTGACGGACTTATCAGAAATGCAAAAGAGAGCAGACAGGAAACAGATGTTGAGAAATTGCAGCAGAGGGATTACTTAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTGGTTGATATGCGGGGAGCTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCCGGTCATGAAACAACGGCTGCAGTTCTTACTTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAAGAAGGCTCAAGCAGAGGTAGATTTGGTGCTGGGTACGGGGAGGCCAACTTTTGAATCACTTAAGGAATTGCAGTACATTAGATTGATTGTTGTGGAGGCTCTTCGTTTATACCCCCAACCACCTTTGCTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGTGGGCACAAAGGTGAAAAAGATGGTTATGCAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATAGATCTCCATATTTTTGGGACCGCCCTGATGACTTCGAACCAGAGAGATTTCTTGTGCAAAACAAGAATGAAGAAATTGAAGGATGGGCTGGTCTTGATCCATCTCGAAGTCCCGGAGCCTTGTATCCGAACGAGGTTATATCGGATTTTGCATTCTTACCTTTTGGTGGCGGACCACGAAAATGTGTTGGGGACCAATTTGCTCTGATGGAGTCCACTGTAGCGTTGACTATGCTGCTCCAGAATTTTGACGTGGAACTAAAAGGGACCCCTGAATCGGTGGAACTAGTTACTGGGGCAACTATTCATACCAAAAATGGAATGTGGTGCAGATTGAAGAAGAGATCTAATTTACGTTGA 1731 0.4246 MSAATSSTLSTVTDANLHSRFHSRLVPFTHHFSLSQPKRISSIRCQSINTDKKKSSRNLLDNASNLLTDLLSGGSIGSMPIAEGAVSDLLGRPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPAFHNSYLEAMVKIFTTCSERTILKFNKLLEGEGYDGPDSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGMWCRLKKRSNLR* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0142 576 Pfam Cytochrome P450 102 567 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 SUPERFAMILY Cytochrome P450 90 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 Gene3D Cytochrome P450 79 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g0142 576 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
Gso11g0142 576 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 74 572 - -
Gso11g0142 576 PANTHER CYTOCHROME P450 FAMILY 4 74 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0142 Gso-Chr11 1141259 1150127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0142 42 574 Cytochrome P450 AT4G15110 80.337 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0142 K24543 - gmx:606504 1149.81