Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0141 ATGGAATCCATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCTTCATCTCTTCAGTTCTTTTCCATGATGTCTCTCTCACTTTCACCTAGCTTAGGATCATCTCCCTATCAAATGAAATGCGAGGAAAGGGGTTTGGTATTGATCCATTTGTTGCTCGCTGGTGCTAATTTTGTAGCCACCGGTGATTTACAAAATGCAAACCTCACACTTGAGCAGATTTCCCAGCATGCCTCTCTTGATGGGGATACTATGCAGCGAATTGCTTCATATTTTTCTGAAGCACTCGCTGATCGGATACTTAGAACATGGCCCGGCATCCATAGGGCCCTCAATTCCAACAGAATACCTATGGTTTCTGATGAAATTCTTGTTCAAAAGCTCTTCTTTGAGCTTTTACCCTTCCTGAAGTTCTCATATATTCTGACAAATCAAGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATGTAATTGATCTCAATGCGGCTGGGCCGGCGCAGTGGATTGCTCTCCTCCAAGTTTTGAGTGCACGTTCTGAAGGCCCTCCACATTTGAAAATCACCGGGGTCCATCACCAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAGGAGGCAGAAAAGTTGGATATCCCATTCCAATTCAACCCTGTGCTCAGCAAGTTGGAAAATCTTGATTTCGAAAAACTTGGGGTTAAAACTGGGGAGGCACTAGCAATAAGTTCTATTATGCAGTTGCACTCCCTTTTGGCCTTGGATGACGATGCCTCTCGGAGAAAATTGCCTCTTTTGTCGAAAAACTCAAATGCAATTCACCTGCAGAAAGGTCTCCTAACAAACCAGAACACATTGGGAGATTTGCTTGACGGCTATAGCCCGAGTCCCGATTCAGCCTCAGCTTCTGCCTCATCCTCGCCAGCGTCCTCATCGGCTTCGATGAATTCGGAGAGCTTTCTTAATGCCTTGTGGGGTTTATCCCCAAAAGTAATGGTTGTAACTGAACAAGACTTTAATCACAACTGTTTGACCATGATGGAGAGGCTGGCAGAAGCTCTATTTTCTTATGCTGCATATTTTGATTGTTTGGAGTCCACGGTCTCAAGAGCTTCCTTGGACAGAATAAAACTTGAGAAGATGCTTTTTGGTGAGGAGATAAAGAACATCATAGCTTGTGAAGGATGTGAAAGAAAAAAAAGGCACGAAAGGATGGATAGGTGGATCCAAAGACTTGACTTTTCTGGCTTTGCAAACGTGCCTATTAGCTATTATGGGATGCTGCAGGGAAGGAGGTTCTTGCAGACCTATGGCTGTGAGGGTTACAAGATGAAGGAGGAATGTGGTCGGGTTATGATGTGCTGGCAGGAGCGACCCTTGTTTTTCATAACAGCTTGGACACCAAGGAAATAA 1422 0.4437 MESMFQEEGSSSVTSSSSLQFFSMMSLSLSPSLGSSPYQMKCEERGLVLIHLLLAGANFVATGDLQNANLTLEQISQHASLDGDTMQRIASYFSEALADRILRTWPGIHRALNSNRIPMVSDEILVQKLFFELLPFLKFSYILTNQAIVEAMEGEKMVHVIDLNAAGPAQWIALLQVLSARSEGPPHLKITGVHHQKEVLDQMAHKLTEEAEKLDIPFQFNPVLSKLENLDFEKLGVKTGEALAISSIMQLHSLLALDDDASRRKLPLLSKNSNAIHLQKGLLTNQNTLGDLLDGYSPSPDSASASASSSPASSSASMNSESFLNALWGLSPKVMVVTEQDFNHNCLTMMERLAEALFSYAAYFDCLESTVSRASLDRIKLEKMLFGEEIKNIIACEGCERKKRHERMDRWIQRLDFSGFANVPISYYGMLQGRRFLQTYGCEGYKMKEECGRVMMCWQERPLFFITAWTPRK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0141 473 ProSiteProfiles GRAS family profile. 40 470 IPR005202 -
Gso11g0141 473 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 471 IPR005202 -
Gso11g0141 473 Pfam GRAS domain family 49 470 IPR005202 -
Gso11g0141 473 PANTHER SCARECROW-LIKE PROTEIN 3 5 471 IPR030008 GO:0003700|GO:0005634|GO:0009739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0141 Gso-Chr11 1134692 1137179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0141 1 473 GRAS Transcription Factor Family AT1G50420 59.714 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso11g0141 GRAS 2.2e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0141 - - gmx:100819988 848.58