Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0123 ATGGGATTCTGGGGGATTGAAGTGAAACCTGGCAGGCCATGTCCTTATCACGCTGACAATGTGCGAGGGAAGCTTCATGTTACTCAGGCTACTCTAGGCATTGGCTCATCATCGGAGAAAAGCATTCTTCAGTGCTCTTCTGGACACAAAAGTCCAGTTTTCTTGTGTTCATTGCTACCAGATAAGGTTGAGTCATGCCCTTTGAATCTTGAGTTTGACGCAGATGACTTAGTGGCATTCTCAGTTATTGGTTCACGAAGCATCCACCTTTCTGGTTATTTTGCGGCCGACGATGGGGATGATCTTAGGGATGACTATGAATATGATTCATGGGGGGAGGATATTGAAGGAACTGAGTCAGAGGAGTCATCTGAATATGATAGTGAAGATGGATATGCTGATGACTTTATTGTTGATAGTGATACCGACATGTACCCATCTTCGCCAGTCCCAAATAGTGGAGTTGTAATTGAGGAGATAGTGGATGATGATAAACCTGAAAATGGATATGATCCAACTAAGAAATTAAAGAAAAAGAAACAGGTAGCTCAATTGAAAGAGAAAGACAACAAAAGTTCTGAGCTTCCAATTGTCGCTAAGGGTGATACTGACCTTGTGGAAAGTGAAGACGAAGACGGCTTTCCAATTCCCACTGCAGAGAAAGGGGTGTCTGTCTCTCAGAAGGCAGAAGCAGAAATGAAAGGAGAACAAGCATGTAAGAAAACAGAGAAAGCCAAGAAGGAAAAAGATGTTGATCATTCTGCTAGCGTAAAACGAAAAGTTGATACTGCTGATGAAGATGAGTCACAGGATGGGAAAAAAAAGAAGAAAAGAAACAAGTTGAAAGAGCATATTAAAGGGGAAAGTGATCATGCAACTGGCAATAGCAATGAGACAAAAATTACTGAACCAGATGAAAAGCATCCTGAGGAGATTAAAACTACAATCAACCTGAGTGATGTTTCTCATGCAAAGGATGAAGATGATGGAAAGCTATCCAATAACGAGGTCCTTGCCGAGAAGAAAAACAAGAAGAAAAAGAAGAAAAAGACCAAAGAGTCTGAAGGGGAAGTTGCTGCAAATCAAATTACTACAACTCCTGAAAAGCAGAATTTGTCCACCTCAGAGAAAAAGGGGCAGAAACAAACTGAAACCAAGCCATCCCAAGTGAGAACTTTTCCAAATGGATTGATTATAGAGGAGGTATTTATGGGTAAACCCGATGGCAAAAAAGCTGCTCCTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAACTGCAAAAAGATGGGAAAATATTTGACTCAAATGTGGGAAGGGCACCCTTTAAATTTCGCCTGGGTGTAGGACAAGTCATCAAAGGGTGGGAGGTTGGGATCAATGGGATGAGAATTGGGGACAAACGAAGGATCACAATTCCACCGTCTATGGGATACGCAGACAAACGCGTTGGGAGTATACCACCAAATTCGTGGCTTGTATTTGATGTCGAGTTGGTTGATGTTGATCGCTGA 1512 0.418 MGFWGIEVKPGRPCPYHADNVRGKLHVTQATLGIGSSSEKSILQCSSGHKSPVFLCSLLPDKVESCPLNLEFDADDLVAFSVIGSRSIHLSGYFAADDGDDLRDDYEYDSWGEDIEGTESEESSEYDSEDGYADDFIVDSDTDMYPSSPVPNSGVVIEEIVDDDKPENGYDPTKKLKKKKQVAQLKEKDNKSSELPIVAKGDTDLVESEDEDGFPIPTAEKGVSVSQKAEAEMKGEQACKKTEKAKKEKDVDHSASVKRKVDTADEDESQDGKKKKKRNKLKEHIKGESDHATGNSNETKITEPDEKHPEEIKTTINLSDVSHAKDEDDGKLSNNEVLAEKKNKKKKKKKTKESEGEVAANQITTTPEKQNLSTSEKKGQKQTETKPSQVRTFPNGLIIEEVFMGKPDGKKAAPGKKVSVKYIGKLQKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGINGMRIGDKRRITIPPSMGYADKRVGSIPPNSWLVFDVELVDVDR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0123 503 PANTHER PEPTIDYLPROLYL ISOMERASE 1 250 - -
Gso11g0123 503 PANTHER PEPTIDYLPROLYL ISOMERASE 264 501 - -
Gso11g0123 503 MobiDBLite consensus disorder prediction 357 378 - -
Gso11g0123 503 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 250 - -
Gso11g0123 503 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 264 501 - -
Gso11g0123 503 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 410 499 IPR001179 GO:0003755
Gso11g0123 503 Gene3D - 359 503 IPR046357 GO:0003755
Gso11g0123 503 Coils Coil 334 355 - -
Gso11g0123 503 MobiDBLite consensus disorder prediction 300 341 - -
Gso11g0123 503 SUPERFAMILY FKBP-like 386 501 - -
Gso11g0123 503 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Gso11g0123 503 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 415 502 IPR001179 GO:0003755
Gso11g0123 503 MobiDBLite consensus disorder prediction 163 195 - -
Gso11g0123 503 MobiDBLite consensus disorder prediction 233 274 - -
Gso11g0123 503 MobiDBLite consensus disorder prediction 163 392 - -
Gso11g0123 503 Gene3D Nucleoplasmin core domain 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0123 Gso-Chr11 997819 1002165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0123 415 499 Calmodulin-binding Proteins AT5G48570 50.562 3.37e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0123 K14826 - gmx:100792856 922.924