Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0091 ATGAAGAAGAAGCGTGGGTGGATTTGCTCCCAGTCGTTCTTTTGGTTCCATGCCAGTTGCTGCTTTCACTTGTCTCCAATTGGTTTAGCATTTTCTACGACAGAGGAGGAATTAGCCAAAGCTTTTTCTCAATATGGCAGTGTTCTGAACGCTAATATAATACTGAATAAAACCAAGAATATATCCAAAGGTTTTGGATATGCCACTTCTGCTAAAGAGGAAGAAGCATGCAAGGCACAGATTGATATTACATGGACGAGTTATATATGTAGACGTGTAATTGCCGAACAAGTGATGGTTGAGGCTCAATGA 312 0.4038 MKKKRGWICSQSFFWFHASCCFHLSPIGLAFSTTEEELAKAFSQYGSVLNANIILNKTKNISKGFGYATSAKEEEACKAQIDITWTSYICRRVIAEQVMVEAQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0091 103 SUPERFAMILY RNA-binding domain, RBD 28 81 IPR035979 GO:0003676
Gso11g0091 103 PANTHER TRANSFORMER-2-RELATED 2 97 - -
Gso11g0091 103 PANTHER RNA RECOGNITION MOTIF 2 97 - -
Gso11g0091 103 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 79 IPR000504 GO:0003723
Gso11g0091 103 Gene3D - 27 94 IPR012677 -
Gso11g0091 103 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 88 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0091 Gso-Chr11 750420 753432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0091 32 79 Eukaryotic Initiation Factors Gene Family AT1G22760 37.500 7.29e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0091 - K24979 gmx:102661087 162.54