Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0090 ATGACAACGGTAGCTGCTTCTCTTGATGCCAAAGAGGTGTCTACCTCCAAAACTGACCAAAACCAAGTGTGTGACTGTGATCCCCAAACTAGCCATGTCTTCAAATCAAAATTACCAGATATCCCAATCTCCAACCACCTCCCTCTCCACGCTTACTGCTTTCAGAAACTATCCCAATTCTCCGACCGCCCATGCCTCATCGTCGGACCCGCCGCCAAAACCTACACCTACTCCGAGACACACCTCATTTCACGCAAGATTGCCGCCGGATTGTCCAACCTCGGAATCCGCAAGGGCGACGTGGTCATGATCCTTCTCCAGAACTCCGCCGAGTTCGTCTTCTCCTTCCTCGCTGCCTCCATGATCGGCGCCGTCGCCACCACAGCCAATCCGTTCTACACCGCCGCGGAGATCTTCAAGCAGTTTACCGTCTCCAAGACGAAGCTGATCATAACGCAGGCAATGTACGTGGACAAGCTTCGCAACCACGACGACGGCGCGAAGCTCGGCGAGGACTTCAAGGTTGTGACCGTCGACGACCCGCCGGAAAATTGCCTCCACTTCTCGGTGCTCTCGGAGGCGAACGAGAGCGACGCGCCGGAGGTTGATATCCAACCCGACGACGCGGTGGCGATGCCGTTCTCTTCCGGCACGACGGGTTTACCTAAAGGAGTGGTTCTCACGCACAAGAGTTTAACAACCAGTGTGGCGCAACAAGTTGACGGAGAGAACCCTAACCTCTACCTCACCACCGAGGACGTGCTCCTATGCGTGCTTCCGTTGTTTCACATATTCTCCCTCAACAGTGTGCTTTTGTGCGCGCTTAGGGCCGGGAGTGCGGTTTTGTTGATGCAGAAGTTCGAGATTGGGACGCTGTTGGAGCTCATACAGCGGCACCGCGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGTTGGCGAAGAATCCGATGGTGGCGGATTTTGACCTGAGTTCAATACGGTTAGTGCTGTCGGGAGCTGCTCCCTTGGGGAAGGAGCTCGTGGAAGCTCTCCGGAACAGGGTGCCTCAAGCCGTTTTGGGACAGGGGTACGGGATGACAGAAGCAGGACCAGTGCTGTCCATGTGCTTGGGCTTTGCAAAGCAACCTTTCCCAACAAAATCAGGCTCTTGTGGTACCGTAGTCAGAAATGCAGAACTCAGGGTTGTTGACCCTGAAACTGGTCGTTCTCTTGGCTACAATCAACCCGGTGAAATTTGCATCAGAGGGCAACAGATCATGAAAGGATATCTGAACGATGAGAAAGCGACAGCATTGACCATAGATTCAGAGGGTTGGCTTCACACCGGTGATGTTGGCTATGTAGATGAAGATGATGAAATTTTCATTGTTGACAGGGTGAAAGAACTCATCAAATATAAAGGCTTCCAGGTGCCCCCTGCAGAACTTGAAGGGCTTCTTGTAAGCCATCCCTCCATTGCAGACGCAGCTGTAGTCCCACAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCCTTCGTTGTGAGATCAAACGGCTTTGATCTAACTGAAGAGGCTGTAAAAGAGTTTATAGCTAAACAGGTAGTGTTTTACAAAAGACTGCACAAAGTTTATTTTGTACATGCTATTCCCAAGTCTCCATCAGGAAAGATATTAAGGAAAGACCTCAGAGCAAAGCTAGAAACCGCCGCCACTCAGACGCCTTAA 1713 0.5225 MTTVAASLDAKEVSTSKTDQNQVCDCDPQTSHVFKSKLPDIPISNHLPLHAYCFQKLSQFSDRPCLIVGPAAKTYTYSETHLISRKIAAGLSNLGIRKGDVVMILLQNSAEFVFSFLAASMIGAVATTANPFYTAAEIFKQFTVSKTKLIITQAMYVDKLRNHDDGAKLGEDFKVVTVDDPPENCLHFSVLSEANESDAPEVDIQPDDAVAMPFSSGTTGLPKGVVLTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGTLLELIQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELVEALRNRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELRVVDPETGRSLGYNQPGEICIRGQQIMKGYLNDEKATALTIDSEGWLHTGDVGYVDEDDEIFIVDRVKELIKYKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLETAATQTP* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0090 570 SUPERFAMILY Acetyl-CoA synthetase-like 44 564 - -
Gso11g0090 570 CDD 4CL 43 558 - -
Gso11g0090 570 ProSitePatterns Putative AMP-binding domain signature. 212 223 IPR020845 -
Gso11g0090 570 Pfam AMP-binding enzyme 57 468 IPR000873 -
Gso11g0090 570 Gene3D - 463 567 IPR045851 -
Gso11g0090 570 PANTHER 4-COUMARATE--COA LIGASE 3 32 561 - -
Gso11g0090 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Gso11g0090 570 Gene3D - 25 462 IPR042099 -
Gso11g0090 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0090 Gso-Chr11 744948 749421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0090 28 475 Monolignol Biosynthesis Gene Families AT1G65060 72.727 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0090 K01904 - gmx:547492 1108.59