Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0077 ATGGGGGGTGGAGGAGGTGCAATTGGGGTGAGAGGTCTCAATGAAGATGATGATGATATTGGAAAGATTGAAGAAGAAAACAAGTGGCCACCATGGCTTAGGCCACTTCTCCAAACAAGCTTTTTTGTTCAATGCAAAGTCCATGCAGATTCCCACAAAAGTGAATGCAATATGTATTGCTTAGATTGTATGAATGGAGCCCTTTGCTCTGCCTGTCTTGCTTCCCACAGAGAACACAGAGCTATTCAGATAAGAAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATACAAAAATTTCTGGACATAGCAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTCACCAACACCTGCCAAGTTTGTGAGCGCAACCTTCTTGATTCATTCAGCTTCTGTTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGAGGGGTCCAATGGTGAAGAATCAATAAATGGCATTAGCAATGAAAGTGGAAGAAACAAAATCCAGAGCTTCACACCCTCAACACCACCGCCAACAGTGGTAAATTACAGGACTGCTAAGAGGAGAAAGGGAGTCCCACATAGAGCTCCAATGGGGGGTGCCCTTATTATAGAATACTAA 696 0.4368 MGGGGGAIGVRGLNEDDDDIGKIEEENKWPPWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFLDIAGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERNLLDSFSFCSLGCKIVGTSKKFRKKKMLAETEGSNGEESINGISNESGRNKIQSFTPSTPPPTVVNYRTAKRRKGVPHRAPMGGALIIEY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0077 231 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 226 - -
Gso11g0077 231 MobiDBLite consensus disorder prediction 171 204 - -
Gso11g0077 231 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 226 - -
Gso11g0077 231 MobiDBLite consensus disorder prediction 175 204 - -
Gso11g0077 231 Pfam PLATZ transcription factor 85 156 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0077 Gso-Chr11 627529 630056 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso11g0077 PLATZ 7.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0077 - - gmx:100792668 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1999 1 56511055 56514118 Gso11g0077 11 627529 630056 GST