Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0074 ATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGAGGCCAATTCTATGGATGAGGATAATGCATGTTCTCTTAGGAGCAGAGCTTGTGAAAGCTCACAGCACACTGTCAGTGAAACAAGTAATATGCAGAGTGTTAATTCAAGTCATGATGCTCTGTCTGAAAATGCCGACAGTAGACAAATCATACCGAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACAACACTTCTTGCATCAGTAGAGCCAGTGATGCTAATTTAGTGAACGATAGCCATCAAAGGAATGAAGAGAGAATAATAATGCATGTGGAAAGGGATTCATGTTCTCATGTCCCAGAAAAGTTGTCAGAATGCTTCATTGAGAATTCTAGTTCATCATTGACCAAAGAGAGGGAACCTGTTGTTTCTGGCAAGAAATATATTGCTGTTAAGGATGGCCTTATTGAGAGTACTTCCAAGATTTCACTAAAAGTATGTCCCAAGTCAGAAGCAGATACTGATGTCTGTGATGCTAACAATGAAGATCCTAAATGTGCAGTTCAAGATGGACAGTGTGAGAAAGCTGAAGAGCTGGTTAAATCACCTGGCAAGCAGGAACCTCAATCTGAAGACGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTCGAGAAAGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAAGATGCAGAGGAGAATGAAAAAAAAAGACTGGATGTTGATGACAAAAAAATGGTTGAAGTTAGTTCAACCTCACAAGTTTCTGGCAAAAGACTCTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGTACAGGATCACCAAAGACATCAAGTCCCAAGAGATTAGCTCCAGTGTCCCGAGAATCTTCATTTAAGAGCTTAGATAAATCAAAAGTGAAGCCTGGTCTTCTGATGCCTATTCGAAACCACTCTGGTTGTTATGACACAGAGATTGCTCGCTCTCCTTCCATTGGTTCCCGGGGTCAAAATCCAAAAGGTATGCTGTTGAAGTCTAATTCATTCAACAACTTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCAAAAACAAAAAGGGGGTAATGAACATACTTCAAAGAACATGGAGATGCCTGCTCGGGTGACTGGAAAATCAACATTATTCAAATCCTCAAGTTTGGGGCGATCAAATGCAACTGAATCAAAAGTGAAAATGCTTTCGCCAAAGTCTGCAACTACTCAGGATTTGAAAGGATCTAGACATCTAAAAGAATCAGGTGCATTTGACAGGAAATTTCCATCTAGGATTGATCGTCCTGTGGCTAGTTCAGTTGTTTCATCTCCTAAGGGTGATCAAAAGCTTACACCTCATGCTGAAAGCAACAAAGCTTCAGCAATGAACAACAATCGAGAATTGAAGGTTAACCAGGATGGAAAATCAAGTGCATTATCAAGGTCAATGAGTAATATAAGCCGGAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAACCCGTGTTGATGAAACTCAACAGGATGTGCTGCCTCGATCACGAGAGACAGCAAATCAGGTTGAGAAAAGCAGAAATAGTTCTAGTGATCGTGGAAGGCCAGCTGTTCCGACTTCAAAAAACCAATTCTGCCAAAAATGTAAGGAATTCGGCCATGCTTTGGAATGTTGTACAGCTGTTTCTACACAGGAATCTGGTGCTGAAATATCTGTCACTGCCTCGAGTAGTTCAAAAGAGGAGATGCATAAAGACAATACATTGAAAGCTGCAATCCAGGCTGCTTTACTTAGAAGGCCTGAAATTTACAAGAAGAAAGAAGTATCTAATCAAACTGACGAGGTTTCTACCGCAGGCACAGAGTTGAATTGCGAAGTGACTTCAAGAGACCAAGTTTTGGTTTCCAGCACACTGAAGAATAGCATATCTGCTGATGAAACCCAAGAACGAGAAATCCTTGAGAATTCTACCTCAGATTCTTCCAAATGTTCATCTGCCAATGGTTTGAAGCAACTTAACTCTTGTCCAACTGACTTCCGGTCCCAACCAGGAAAGTCAGATTCCATTGGTCTTGCAACTGGAAAGCCTGTAGTGAGAGACTTGTCTAATAAAGCTTTGACAATGTCAAGTGTTCCTTTGAAGATGTTGGCCTTTCCTGAATATGAATACACCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATATATATACTGGACTTCAGGCACATCTATCCTCTTGTGCTTCTCCTAAGGTTCTTGGGGTAGTGAACAAGTTTCTACCCAAAGTTTCCCTCAGTGAAATTTCTCGCTTGAGCATGTGGCCTTCACAATTTCATCATGGTGGTGTTAGTGATGATAATATTGCTCTTTACTTCTTTGCCAGGGATGTTGAAAGTTATGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAGATTTTGATGGTGTCGAGCTGCTGATATTCCCTTCCAACCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCGTATTTAGGGGGAGGAGGATCAATCATTCAGATTCTGCAAAAAAGATTAGTATTCCCAGTTTGAATGTAATGCCAGTTGAGGAGAAATCCTCAACTGCTGTTTTGACTATGCCTGAAACACATTGTTCGCCACAGTGCAAGGATGAAGAATCAAGTGATTGTGATAAAGCATGCAATGCACTTCTCCCATCCACTTCCATAGACCAACATCAGACTACTGGAAGTAGGAATGTTGATGTCAATGACCAGACACATTTGGGTTCACAAGTAAGCTTAGAGAAGCTAGATAGTAGGATTGACTCAAAATCTACATCAAGGGTTCCAACAAGCAGTACTCTGTTATGTCAAGAAATGAACTCCACTGGTTCATCCCTGAAAGTTAGTGTACTTGAACAAGAACAGTGCAGAGAGTCTAAACCTCCTGAAGCAATGGGAAGGAGTGCAACTAGTAGGATTGTGGAAACAAAAACTGATTCTGATATTTCTGTCAAGCAAGAGAACACTGTGTCTTTGTTTCCTTCTGAAAAAGGTGCTGCAAGCAATATTGATAAAGATAAAATTTCAGAGAAAATGAACAGTGATGAAGACCAGCAGAGGCCTAAGAAGAAACAAGAAGAGGATTGTCCGTATATTGATTTGGAGGCAAATATTGAAAATCAAGAAACAGTTGCTGCAAGCAATTTTAGTAGGGATCAAAATTCAGTAACAATTGTTGTTGATGAAGATCAGCAAAGGCCCAAGAGGAAACAGAAAGATGATCATTATATTGACTTGGAGGCAACACTTGAAGATCAAGAAACAGGTGCTGTAACCAATATATGTGAGGATAAAACTTCAGAAAAAATGGACGTTGAGGAAGATTGGCAATGGCTTAAGAGGAAACAGAAAGCTGATCACTATATTGACTTGGAGGCAACTTTTCATGAAGACCCAAGTGAAGAAGGGATCAACTGCGCGCTACCTTATGATAAAGTTCAGCATGTAGATCTTTCTGACACAATTATGCAGGGTTCTGGTATCAGTTGTCAGAAAATACCTTGGAATGAGGGAAATGCCAAGTTAGAAGACAGAGAAAGTTCTGGCAAGAAGCTAAAGACAATTTTCGGTGGGATTTATGGTTCTGGAGGTAGAGACTCTTTTAATGACAGTTTTACATCTCTTGGAAATGATCTTGGCTCCTGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCTTGTGATGAGAAAATCATCCAGGAGGACTTGGGAACCCTGGAAAGAACCTTCTTTCCAGTTGGCACACTGAATATTACCAACTCACTATCAGTGATGGATAGTATGTCAACCAAAGGGGTTGGTGAGTATGATGAAGGATTTCAAGATGGGATTCCCAATCTAGAGCTTGCCTTAGGGGGAAAAACAAAACCACCACCAGCTGCGCCTAAGGGTATGCTGCCTTTCTTAGTTGGGGCAGTAGACAGGCAAAATAACCACCCTGATAACTTGGGAGACAGGCAGGAGGATGAAGGTGTCGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTCCAAACAAGGAACACACAAACGCTGCAGAGCTTTTGCCTGATGGGCAGCGTGTGAACAACCCGTTTTTCCTTTTTGGGAGAAAATAA 4431 0.4144 MRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGEANSMDEDNACSLRSRACESSQHTVSETSNMQSVNSSHDALSENADSRQIIPNKYQDSKHLEGHDDNTSCISRASDANLVNDSHQRNEERIIMHVERDSCSHVPEKLSECFIENSSSSLTKEREPVVSGKKYIAVKDGLIESTSKISLKVCPKSEADTDVCDANNEDPKCAVQDGQCEKAEELVKSPGKQEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENEKKRLDVDDKKMVEVSSTSQVSGKRLSDNIEVAPAAKRQALESSTGSPKTSSPKRLAPVSRESSFKSLDKSKVKPGLLMPIRNHSGCYDTEIARSPSIGSRGQNPKGMLLKSNSFNNLNSKPRVKLVDEVVPQKQKGGNEHTSKNMEMPARVTGKSTLFKSSSLGRSNATESKVKMLSPKSATTQDLKGSRHLKESGAFDRKFPSRIDRPVASSVVSSPKGDQKLTPHAESNKASAMNNNRELKVNQDGKSSALSRSMSNISRKSLEPQVSSERTSTRVDETQQDVLPRSRETANQVEKSRNSSSDRGRPAVPTSKNQFCQKCKEFGHALECCTAVSTQESGAEISVTASSSSKEEMHKDNTLKAAIQAALLRRPEIYKKKEVSNQTDEVSTAGTELNCEVTSRDQVLVSSTLKNSISADETQEREILENSTSDSSKCSSANGLKQLNSCPTDFRSQPGKSDSIGLATGKPVVRDLSNKALTMSSVPLKMLAFPEYEYTWQGVFEVHRNGKPPDIYTGLQAHLSSCASPKVLGVVNKFLPKVSLSEISRLSMWPSQFHHGGVSDDNIALYFFARDVESYERHYKGLLDHMIRNDLALKGDFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRRINHSDSAKKISIPSLNVMPVEEKSSTAVLTMPETHCSPQCKDEESSDCDKACNALLPSTSIDQHQTTGSRNVDVNDQTHLGSQVSLEKLDSRIDSKSTSRVPTSSTLLCQEMNSTGSSLKVSVLEQEQCRESKPPEAMGRSATSRIVETKTDSDISVKQENTVSLFPSEKGAASNIDKDKISEKMNSDEDQQRPKKKQEEDCPYIDLEANIENQETVAASNFSRDQNSVTIVVDEDQQRPKRKQKDDHYIDLEATLEDQETGAVTNICEDKTSEKMDVEEDWQWLKRKQKADHYIDLEATFHEDPSEEGINCALPYDKVQHVDLSDTIMQGSGISCQKIPWNEGNAKLEDRESSGKKLKTIFGGIYGSGGRDSFNDSFTSLGNDLGSCSSVEDKGCEEACDEKIIQEDLGTLERTFFPVGTLNITNSLSVMDSMSTKGVGEYDEGFQDGIPNLELALGGKTKPPPAAPKGMLPFLVGAVDRQNNHPDNLGDRQEDEGVAASLSLSLSFPSPNKEHTNAAELLPDGQRVNNPFFLFGRK* 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0074 1476 MobiDBLite consensus disorder prediction 1111 1140 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 223 245 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 458 489 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 519 580 - -
Gso11g0074 1476 ProSiteProfiles Zinc finger PHD-type profile. 249 300 IPR019787 -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 722 745 - -
Gso11g0074 1476 PANTHER - 1 1470 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 1082 1107 - -
Gso11g0074 1476 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 1470 - -
Gso11g0074 1476 SMART PHD_3 251 298 IPR001965 -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 435 618 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 600 618 - -
Gso11g0074 1476 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 324 IPR013083 -
Gso11g0074 1476 SUPERFAMILY FYVE/PHD zinc finger 238 300 IPR011011 -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 340 374 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 581 599 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 490 510 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 343 361 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 1066 1140 - -
Gso11g0074 1476 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0074 Gso-Chr11 605893 614673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0074 248 309 C2H2 Transcription Factor Family AT3G01460 33.871 7.04e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0074 - - gmx:100806639 2915.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2002 1 56528117 56537143 Gso11g0074 11 605893 614673 GST