Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0073 ATGAGTAAGTGGCCTTTCACAATATCTCAGTGGCAGGAACTGGAACATCAAGCTTTAATTTACAAATACATGGTGGCTGGTCTTCCTGTGCCTCCTGATCTAGTCATTCCCATTCAGAACAGCTTCCACTCCATTTCCCAAACCTTCTTGCACCATCCCTCTACCACCATGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGACGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCCTACCCAGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACAGTCATCATCCAATGTGTCATCATTGACTGTAACTGCTGGCAGCAGCACCAGTGCAACTGGAAATTTCCAGAACCTTTCCACCACAAATGCATATGGTAATCCCCAAGGGACTGCTTCTGGAACAGACCAAACCCACTATCACATGGATTCCATTCCCTATGGGATCCCAAGTAAAGAATACAGGTATTTTCAAGGATCTAAATCTGAGGAACATAGTTTCTTGTCCAAAACTTTAGGAAGCAACAGGGTTCTACACATGGAGCCACAGATGGACAACACTTTGATGCCAACCGGTGGAGTTGCCTCATTCTCTACATTGAGATCAAATAATAATTCCATGTTGCAGGGTGATTATCTGCAGCCTTCTTTCTTATCTAGTGAATATGCCTCGGCAGAAACTGTGAAGCAAGAGGGTCAGTCCCTTCGACCGTTCTTTGATGAATGGCCTAAAAGCAGGGACTCATGGTCTGGTCTGGAAGATGAGAGATCCAATCACACTCAACTCTCAATATCCATTCCTATGTCATCGTCAAATTTCTCTGCAACTAGCTCTCATTCCCCACATGGTGAGATTTAA 927 0.4585 MSKWPFTISQWQELEHQALIYKYMVAGLPVPPDLVIPIQNSFHSISQTFLHHPSTTMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSNVSSLTVTAGSSTSATGNFQNLSTTNAYGNPQGTASGTDQTHYHMDSIPYGIPSKEYRYFQGSKSEEHSFLSKTLGSNRVLHMEPQMDNTLMPTGGVASFSTLRSNNNSMLQGDYLQPSFLSSEYASAETVKQEGQSLRPFFDEWPKSRDSWSGLEDERSNHTQLSISIPMSSSNFSATSSHSPHGEI* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0073 308 MobiDBLite consensus disorder prediction 278 308 - -
Gso11g0073 308 ProSiteProfiles QLQ domain profile. 5 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso11g0073 308 SMART QLQ_2 4 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso11g0073 308 MobiDBLite consensus disorder prediction 97 167 - -
Gso11g0073 308 MobiDBLite consensus disorder prediction 109 163 - -
Gso11g0073 308 Pfam WRC 69 111 IPR014977 -
Gso11g0073 308 MobiDBLite consensus disorder prediction 269 308 - -
Gso11g0073 308 PANTHER GROWTH-REGULATING FACTOR 5 2 300 - -
Gso11g0073 308 PANTHER - 2 300 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso11g0073 308 Pfam QLQ 5 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso11g0073 308 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0073 Gso-Chr11 591874 595709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0073 5 111 GRF Transcription Factor Family AT3G13960 63.303 1.72e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso11g0073 WRC 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0073 - - gmx:100817313 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2003 1 56545034 56550610 Gso11g0073 11 591874 595709 GST