Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0030 ATGCCTAGTCCATTGCTATCATTATCATTAGTGCTGCTATTCTTGATTTCATGTGGAAATATTCATGAATGTGAAGCTCAAGATACCGAGGCTTTGCCTCCAGCAGCAGAAACTTGTAACGGGGTTTTCATTTCCTATGACTTTCTCACTCGAAGAAAAGAATTCCCTCGCGTGAAGAATGCCACGGCACAGTCTTGGGCCTTCAATTCCACCGCAACAGTTCTCAACACCGGCAAAGACGTGGTTAAGGCGTGGAGGCTGTTCATAGGTTTTCAACATGACGAGATTCTAATCTCTGCCAGCGGAGGTAATCTAATCGATGGAACTGACTTCCCTGCTCTGGTAGGAAATGGCACTACCTTTGTTGGATCTTCTGTGCCAGATTTGGATAGCTCCATCAACACAGCTCAAGATTTAACCCAAATTTCAGCCATGATCCAGCTTATTGGCACCCAGTTTGGAGTAAGGCCTCCTACTATTCCTATGCCCAAAACCATCAAGTTGGTAAATGATGGTTACAAGTGCCCCCTACCAACTACCCGTAAGGGTTCCATGTATGCGTGTTGTAAAAAAGACCCTAAATTCAAGGCTGTACTACGGAAGACAAAATTCTTGCCACGGCAACAAGGGGATCTTACCATATCCTATGACGTGAATCAAGTGTATGAGAATAATTATATGGTAGAGGTGACCATGGAGAACAATCACCTTTTGGGACGGCTGGATCATTGGAACTTGACTTGGGAGTGGACAAGAGGGGAGTTTATATACAGTATGAAAGGTGCTTTCACACGTGTGATAGAATATTCAGGTTGCATCTATGGAGCTGCAGGACAGTATTACAAGGACATGGATTTTTCTAAAGTCGTTAACTGTCAAAAGAATCCAATAATCAGTGACTTGCCTCCAGAGAAAGCTAATGACACTGAAATTGGAAAGATACCTCACTGTTGCAAAAACGGAACTCTTCTACCTATCCTTATGGATCCAAGCAAATCCAAGTCTGTTTTCCAAATGCAAGTGTTCAAAGTTCCACCTGATCTAAACAAAACAGCAATTTTCCCTCCAGAGAAATGGAAAATAACGGGCATTCTCAACCCGGAATACAGATGTGGGGCACCTATTAGAGTGGATCCTGCACAATCTCAAGATCCCAGGGGACTTGAAGCAACGGTTATTGCCATTTCAAGTTGGCAAATAGTCTGCAATATCACTAAGCCAACCAAGAGGAGCACTCGCTGCTGTGTTTCTTTCTCTGCTTATTACAATGAGTCCATAGTACCTTGCAACACATGTGCCTGTGGTTGTGATGAAAATAACAGAAGATGTAATCCGAATTCACCAGCAATGCTTCTCCCTCCAGAAGCTCTTCTTGTACCCTTTGAGAATAGGACAAAAAAGACAGTTGCTTGGGCCAAACTAAAGCATTTTAAAGTCCCAACAAAATTACCATGTGCTGACAACTGTGGAGTTAGCATAAACTGGCATGTAGTTTCGGACTTCAAAGGTGGGTGGAGTGCCAGAATCACTATGTTCAATTGGCAGCATACGAATTTTGAGAATTGGTTCACTGCACTGCAATTCAAGAAGAAGACTGCTCTTGGTTACGAAAAAGTTTATTCTTTTAATGGAACATTCCTTCCGAAGCTCAATCATACTATTTTCTTGCAAGGAACACAAGGATCAAACTTTTTGTTAGCTTTAGACAATGGAACAAACCCAAAGGTGCCCGGAAAAGCACAATCTGTTCTTTCCTTTACTAAGAAGTTTGCACCAGGCATGAAAATTGCAAAAGGAGATGGGTTCCCATCAAGGGTCTTTTTTAATGGTGAAGAGTGTTCTATTCCTACCCGTTTCCCTGTGGGAAATGGAAACCAACATAATGCAGATTCATTAAACCTACACCTACTATTAGCTTTAGTCCTAGCTTTTACAATGAGTATAATATTGTATTAA 1956 0.4192 MPSPLLSLSLVLLFLISCGNIHECEAQDTEALPPAAETCNGVFISYDFLTRRKEFPRVKNATAQSWAFNSTATVLNTGKDVVKAWRLFIGFQHDEILISASGGNLIDGTDFPALVGNGTTFVGSSVPDLDSSINTAQDLTQISAMIQLIGTQFGVRPPTIPMPKTIKLVNDGYKCPLPTTRKGSMYACCKKDPKFKAVLRKTKFLPRQQGDLTISYDVNQVYENNYMVEVTMENNHLLGRLDHWNLTWEWTRGEFIYSMKGAFTRVIEYSGCIYGAAGQYYKDMDFSKVVNCQKNPIISDLPPEKANDTEIGKIPHCCKNGTLLPILMDPSKSKSVFQMQVFKVPPDLNKTAIFPPEKWKITGILNPEYRCGAPIRVDPAQSQDPRGLEATVIAISSWQIVCNITKPTKRSTRCCVSFSAYYNESIVPCNTCACGCDENNRRCNPNSPAMLLPPEALLVPFENRTKKTVAWAKLKHFKVPTKLPCADNCGVSINWHVVSDFKGGWSARITMFNWQHTNFENWFTALQFKKKTALGYEKVYSFNGTFLPKLNHTIFLQGTQGSNFLLALDNGTNPKVPGKAQSVLSFTKKFAPGMKIAKGDGFPSRVFFNGEECSIPTRFPVGNGNQHNADSLNLHLLLALVLAFTMSIILY* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0030 651 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0031225
Gso11g0030 651 PANTHER COBRA-LIKE PROTEIN 7 9 647 - -
Gso11g0030 651 PANTHER COBRA-LIKE PROTEIN 7 9 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0030 Gso-Chr11 232849 235528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0030 33 648 COBRA Gene Family AT3G20580 57.395 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0030 - - gmx:100799716 1328.54