Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0020 ATGAGGGGAGGGGAGGAGAGATCGACGACAGGGATTCGAAAGAAGGGAAGCGGAGTGAGGCAATGGCTGGTACTGGACGGCAAAGGAGAGACGGAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGCGGACGGGACTCCCCGCGCGAGACCTGCGTATATTGGACCCTCTCTTGTCCTACCCCTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTTATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCAAGAGCTCCTCCTCCTCAACTCTCGCGACCCCTCCGTCACCCCCTTCCTTCATGAGCTCCAGGCAAGGATCATCCGCCACCACAACCAGGCTGATGCTGACCCCAACCCCAACCCCAACGACGCCATCAAGATTCTTCCCTTCGAGTTCGTTTCCCTCGAGGCCTGTCTGGAGGCTGCTTGTAGCGTCTTGGAAAACGAGGCTAAAACCTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACCTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACCGGTCGTGTTCAGAAGGTCAGGGATGAATTGGAGCACCTGCTCGATGACGACGAAGATATGGCTGAGATGTATCTCTCTGAAAAGCTAGCCGAACAACAGGTCTTGGATGGCGACGTCGTCGTCGTCGACGACGACGATGACGACGACGATACCTCTTCTGCCGACAACGGCGATCTTCTTCAACCTCACAGGACCGCTCCTGAATTATCGTTCGACAATGTTCTCGGTAGGGACAGCGCCTCCTTCAGTGCCGTCACCAAGCAACTTGATGTCGAGGAGCTTGAGATGCTCTTGGAGGCTTACTTTGTCCAGATTGATGGCACCTTGAACAAGCTCTCTACGCTGAGGGAGTACGTTGATGACACAGAGGATTACATCAACATCATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGCGCCTTTGTTGTTGTGGCGGGTATTTTTGGCATGAATATTCACATTGAGCTATTTGATGACCAGAAAGCGGGGATGACGCAATTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTAGAGTAA 1200 0.5375 MRGGEERSTTGIRKKGSGVRQWLVLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAQELLLLNSRDPSVTPFLHELQARIIRHHNQADADPNPNPNDAIKILPFEFVSLEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLSEKLAEQQVLDGDVVVVDDDDDDDDTSSADNGDLLQPHRTAPELSFDNVLGRDSASFSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0020 399 Gene3D Magnesium transport protein CorA, transmembrane region 95 327 - -
Gso11g0020 399 PANTHER - 118 398 - -
Gso11g0020 399 PANTHER - 10 116 - -
Gso11g0020 399 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 118 398 IPR039204 -
Gso11g0020 399 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 116 IPR039204 -
Gso11g0020 399 MobiDBLite consensus disorder prediction 231 254 - -
Gso11g0020 399 CDD Mrs2_Mfm1p-like 22 397 IPR039204 -
Gso11g0020 399 Gene3D - 8 93 - -
Gso11g0020 399 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0020 Gso-Chr11 125183 127531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0020 22 399 MRS2 Gene Family AT3G19640 62.100 1.20e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0020 - K16075 gmx:100788454 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2066 1 57046016 57048760 Gso11g0020 11 125183 127531 GST