Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0013 ATGGGGCACTCCAATGTGTGGAACTCTCATCCAAAGAACTACGGACCTGGTTCTCGCACCTGCCGTGTGTGTGGGAATCCTCATGGATTGATCAGGAAGTATGGGCTTATGTGTTGCAGGCAGTGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAGTATCGCTGA 171 0.4971 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR* 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0013 56 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Gso11g0013 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 - -
Gso11g0013 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
Gso11g0013 56 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 49 - -
Gso11g0013 56 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0013 Gso-Chr11 81645 83524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0013 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.36e-34 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0013 K02980 - gmx:100817876 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2072 1 57094430 57095768 Gso11g0013 11 81645 83524 GST
Gso11g0013 11 81645 83524 Gso20g1056 20 40289299 40290452 PCT
Gso11g0013 11 81645 83524 Gso10g2300 10 50053324 50054636 PCT
Gso20g1056 20 40289299 40290452 Gso11g0013 11 81645 83524 PCT
Gso10g2300 10 50053324 50054636 Gso11g0013 11 81645 83524 PCT