Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0005 ATGGGAACCAGGTACATGTGCGCTTTATTAATATTGTCTTTATTGCTTCATTCATTTATGTTTATTGGGGCAGAGGAAGGGGTGGGCGGAAGGGAAACTATAAGAGCAAGTGGCCACGTGCAAGGCGGTTATTTTTACGGCTCTCCACCTCCACCTCCCCCGAAGTGTCACCCACCGCCTCCACCTCCACCACCAGTAAGGTTGGAGAGAGCTCGCAGAGCGCTTGAAAAATTCACTCGTTTAGTGGATGACCCAAATGGGTATACGAGTAACTGGAAGGGTAGCGACGCTTGTAAGTTCAGGGGGGTGAGATGTGCGAAATATCCAGACGGACAGCAAGCAGTTGCGGGACTAGATCTGAATGGAGCTGGCCTCTCTGGAAAAAAATGTACAGCTCTCATGCTCTCCGGCCTCTTGGACAGGATACCAGAGCTCACATTCTTCCACGTCAACTCCAACAACTTCAGCGGTGCCATCCCAACCGACATCACCAAGTACAAATTTTTCTTCGAGTTAGACCTCAGTAACAACAAATTGGAGGGCGAGTTCCCAAAGGAAGTGCTCCAGCCCAAGCCCAAGGACCAGCAGCTGGTGTTCCTCGACCTCAGGTTCAACCGTCTCTCCGGCCCAATTCCACCCCAACTCTTTGACTTGGATCTCGATGTGATTTTCATCAACAACAATGAATTCACTGGCAATCTCCCCGATAACTTTGGCTCCACTCCTGCCAGGTACCTCACTTTTGCCAACAACCAGCTCACTGGTCCAATCCCCCCAAGCATCGGCAAAGCTTCCAAAACCCTCACCGAAGTCCTCTTCTTGGGCAACCACTTCCAGGGCTGCTTGCCCTTCCAAATTGGCTACCTCGTTAAGGCCACCGTCTTTGATGTCAGCAAAAACTCCTTAACGGGTCCCATCCCACACTCCTTTGCCTGCTTGGCAAGCATCCAGTTCCTCAACTTGGAGCGCAACCAGTTTTACGGAGAAGTTCCGGAGATGCTTTGTCAGCTCCCAGGACTCCGCAACAATGGGAGCCTGTCTTTATCCGACAACTATTTCACTCAGGTTGGCCCTGCATGCAGGAACCTCATAAAAAACAAAGTGCTGGACGTGAGCAACAATTGCATCCTGGGTCTTCCAAATCAAAGGCCTCACGGACAATGCACAGAATTTTTCTCCAAGATCAAGCCCTGCCCAAATCCAAAGAATCTCCATTACGTCCCTTGTAAGGGATACTACCCGCACACCCACCCCGCCGCCGCCGCTCCTCCGCTAACTTACAACTCTCTCAACCCTCATCATCTTCATCTCTAG 1314 0.5099 MGTRYMCALLILSLLLHSFMFIGAEEGVGGRETIRASGHVQGGYFYGSPPPPPPKCHPPPPPPPPVRLERARRALEKFTRLVDDPNGYTSNWKGSDACKFRGVRCAKYPDGQQAVAGLDLNGAGLSGKKCTALMLSGLLDRIPELTFFHVNSNNFSGAIPTDITKYKFFFELDLSNNKLEGEFPKEVLQPKPKDQQLVFLDLRFNRLSGPIPPQLFDLDLDVIFINNNEFTGNLPDNFGSTPARYLTFANNQLTGPIPPSIGKASKTLTEVLFLGNHFQGCLPFQIGYLVKATVFDVSKNSLTGPIPHSFACLASIQFLNLERNQFYGEVPEMLCQLPGLRNNGSLSLSDNYFTQVGPACRNLIKNKVLDVSNNCILGLPNQRPHGQCTEFFSKIKPCPNPKNLHYVPCKGYYPHTHPAAAAPPLTYNSLNPHHLHL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0005 437 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 37 417 - -
Gso11g0005 437 Gene3D Ribonuclease Inhibitor 68 242 IPR032675 -
Gso11g0005 437 Pfam Leucine rich repeat N-terminal domain 71 105 IPR013210 -
Gso11g0005 437 MobiDBLite consensus disorder prediction 42 65 - -
Gso11g0005 437 Gene3D Ribonuclease Inhibitor 243 407 IPR032675 -
Gso11g0005 437 SUPERFAMILY L domain-like 70 380 - -
Gso11g0005 437 MobiDBLite consensus disorder prediction 46 65 - -
Gso11g0005 437 PANTHER BNAC05G26270D PROTEIN 37 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0005 Gso-Chr11 40299 42274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0005 67 398 Trihelix Transcription Factor Family AT1G12040 41.071 5.97e-76 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0005 - - gmx:100795489 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2084 1 57173792 57175600 Gso11g0005 11 40299 42274 GST