Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2619 ATGGCTTTAGAGCAGGAGGGTCAGAATAGGAACACAAACGGCGTAGTGGATGCTGGAGATGAGGGAGGGAAAGCGCCGAGACTGCCTCGGTGGACAAGACAAGAAATTCTGGTTCTGATACAGGGAAAGAGAGACGCTGAGAACAAGTTCAGGAGGGGCCGAACCGCGGGTCTGCCATTCGGGTCGGGTCAGGTGGAGCCGAAATGGGCATCGGTATCTTCCTACTGCAGAAAGCATGGAGTGAACAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAGGAATGGGAGTCTCAGATACGGGAGGAGACGGAGTCGTTTTGGGTCATGAGGAACGATTTAAGAAGAGAGAGGAAATTGCCCGGATTTTTCGATAAGGAGGTATATGATATTCTTGATTCACCAGCGGCCTTGGCTCTCGCTCTTTCATCCTCATCTCCTCCTCCTCCAACCACAACCAAAACAATAACACTCCCTGCTGAGGAGCCTCTGCCTCACCTCTATGATAGTAATCGGAGCGCGCCCGGTGACGGTGAGGATGGCTTGTTCTCAGATTTTGAACAAGATGAAGTCGCTGCCAGTTCGAAGAAGAACAAGGACATTCCTGCTCCCATTCCTATCTCAGAGAAGCAATACCAACCACTCCTCCGTCGATGCCAAGCTGAAGATGTGACTAACGAGAAACAGTCCACTTCAAATCCAGAAATGGGTTCTACTTCTCAAGGAGAGAGGAAAAGGAAGCGGTTAGCAACTGACGGAGAGGAGGAAACTTTGCAATATCAATTAATTGATGTCTTGGAAAGAAATGGCAAGATGCTAAGTGCTCAACTTGAAGCGCAGAATATAAATTTCCAGTTGGATCGTGAGCAGCGTAAAGACCATGCAAGTAATTTGGTTGCTGTGCTTGATAAGCTTGCGGATGCTCTAGGGAGAATCGCTGATAAATTATAG 978 0.4877 MALEQEGQNRNTNGVVDAGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREETESFWVMRNDLRRERKLPGFFDKEVYDILDSPAALALALSSSSPPPPTTTKTITLPAEEPLPHLYDSNRSAPGDGEDGLFSDFEQDEVAASSKKNKDIPAPIPISEKQYQPLLRRCQAEDVTNEKQSTSNPEMGSTSQGERKRKRLATDGEEETLQYQLIDVLERNGKMLSAQLEAQNINFQLDREQRKDHASNLVAVLDKLADALGRIADKL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2619 325 ProSiteProfiles Myb-like domain profile. 30 96 IPR001005 -
Gso10g2619 325 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 325 - -
Gso10g2619 325 MobiDBLite consensus disorder prediction 1 15 - -
Gso10g2619 325 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 12 325 - -
Gso10g2619 325 MobiDBLite consensus disorder prediction 234 248 - -
Gso10g2619 325 Gene3D - 31 101 - -
Gso10g2619 325 MobiDBLite consensus disorder prediction 1 27 - -
Gso10g2619 325 Pfam Myb/SANT-like DNA-binding domain 30 119 IPR044822 -
Gso10g2619 325 MobiDBLite consensus disorder prediction 151 167 - -
Gso10g2619 325 MobiDBLite consensus disorder prediction 151 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2619 Gso-Chr10 53117597 53121305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2619 25 104 Trihelix Transcription Factor Family AT1G76890 28.750 6.96e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso10g2619 Myb_DNA-bind_4 9.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2619 - - gmx:100797767 609.372