Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2618 ATGGGTTGTTTTTCGTGCTTCGATTCGCGGGAGGACGAGATGCTGAATCCCAATCCTCAGCAGGAAAATCACCACCATGAACATGAACATGATCATGATCTTAAGCCCCCTGTTCCTTCTCGTATTTCCAGATTGCCGCCCTCTGCCTCTGCAGGAGACAAGCTACGGTCAACAACAAGTAATGGAGAGTCCAAAAGGGAATTGGCTGCTGCTGTTCAAATTGCCGCTCAAATTTTCACTTTCCGTGAGCTTGCAGCCGCAACGAAAAACTTCATGCCCCAATCCTTTTTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAGGGCCTCCTGGAAACCACCGGTCAGGTTGTGGCTGTTAAACAGTTAGACAGAGACGGTCTTCAGGGTAATCGGGAATTCCTCGTTGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTCAATCTCATTGGATACTGTGCTGATGGTGACCAACGCCTCTTAGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCATCTTCATGATCTTCCCCCGGATAAGGAACCATTAGATTGGAACACCAGGATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATACCTTCATGACAAAGCAAATCCTCCTGTCATTTATAGAGACTTCAAATCATCTAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCAGACTTTGGTCTTGCAAAGCTCGGTCCAGTTGGTGACAAATCACACGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCCCCAGAATATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCGACCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCACAGCTGCAGGGACGGTATCCCATGCGAGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCTGCAGCACGTCCTCTCATTGGGGATGTGGTGACAGCCCTTTCGTTTCTAGCCAACCAGGCATATGACCATAGGGGGGGAGCTGGTGACGATAAAAGGAACAGAGTATTGAAAAATGGTGAAGGTGGAGGGGGAGGATCTGGAGGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGCAACAACAGGGATCTTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATGTGGGGAGAGAATTGGAGAGAAAAAAGACGACAAAGTGCGCAGGGCAGTTTTGATGGTTCTAACGCTTAG 1383 0.4743 MGCFSCFDSREDEMLNPNPQQENHHHEHEHDHDLKPPVPSRISRLPPSASAGDKLRSTTSNGESKRELAAAVQIAAQIFTFRELAAATKNFMPQSFLGEGGFGRVYKGLLETTGQVVAVKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPQLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDHRGGAGDDKRNRVLKNGEGGGGGSGGRWDLEGSEKDDSPRETARMLNSNNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDGSNA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2618 460 Gene3D Phosphorylase Kinase; domain 1 52 167 - -
Gso10g2618 460 CDD STKc_IRAK 97 365 - -
Gso10g2618 460 Gene3D Transferase(Phosphotransferase) domain 1 168 388 - -
Gso10g2618 460 MobiDBLite consensus disorder prediction 15 38 - -
Gso10g2618 460 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2618 460 PANTHER OS07G0668900 PROTEIN 1 455 - -
Gso10g2618 460 SUPERFAMILY Protein kinase-like (PK-like) 73 367 IPR011009 -
Gso10g2618 460 Pfam Protein kinase domain 95 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2618 460 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Gso10g2618 460 MobiDBLite consensus disorder prediction 12 63 - -
Gso10g2618 460 Coils Coil 417 437 - -
Gso10g2618 460 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 455 - -
Gso10g2618 460 MobiDBLite consensus disorder prediction 375 460 - -
Gso10g2618 460 MobiDBLite consensus disorder prediction 403 451 - -
Gso10g2618 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2618 Gso-Chr10 53103051 53106173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2618 1 448 Glycoside Hydrolase AT3G07070 56.541 8.37e-169 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso10g2618 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2618 K13430 - gmx:100305406 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g2040 20 50912471 50917601 Gso10g2618 10 53103051 53106173 GST