Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2617 ATGGCCATGTCATCAAGAAACGATGATATTGGGATAAGGGAAGGGGAAAAGGAGGAGGTGTTGCAAGTTGTGGAGGATGTTGATACTTTTCTCCGTAGTGGTGGGGATCATGTTCCTGATTGTGTTCATGTGTTGCCCAAATTGTTAGAGCGTATTGTGGATAAATACAACGATGGGAGAAAAAAGTTAGGGGAAGAGCCAGAAGATGACAAGTCCTTCCTAAATGTTGTGGAACGCATCTTCAAGCTTTCCACTTGCGATACATGTGATATTGCCTTGGACCAAACTAGTTCTGTCCTAGAAAAAGCAATGTCCCTGTTAGAGAAAGACCTCTGTTCTCTTCTAGAGGAACCCAAACAAAAAGCACCAAAGAAATCATTCTCCTTTGGTTCTCGTTCTGATTTATCTCTCATTCCCTCTAAGTCCCCTTTTTTGGAACAAGATCAGGATAACCATGACTTCCCTTTTAATTTCTCCTCACAAAAAATTTCCATTTTAAACAAGATCACCACTACCATGATCACAACCGGTTACCAGATCGAATGTTGCATGACTTTTGCCAATTTTAGGCGAAGTGCTTTTACAACTGCATTGCAAAGATTTGGGCATAGGAACATGAAAATGGAAGATGTGTACAAAATGCCATGGGAATCACTCGAAGGAGAAATTGCAACATGGAACCAAGTGGTTTGGCATTGCACCACCGTGCTTTTCAACGCTGAACAAAGGCTTTATGACTCTATCTTCCCCAATCAACCTTCTATATCTCAAAAATTGTTTGGTGATCTTGCACGATATGTCATCATTCGTTTACTTAACTTTGCACAAGGTGCAGTTTTAACGAAATGGTCAGCAGAGAAACTATTCAAATTCCTGGATATGTACGAGACTTTGAGGGAAGACATTGTTGGGGGTTCTTATTTGGAGTCGTGTGCAAAAGAGTTAGCATACGAGACAAGCACTACAAAGGACATGATAATAGAGGCTATTGTGGCCATGTTTTGTGATTTGAAAACCTCTATCAAGAATGATAATGAAAGGATTCCTGTCCCTAATGGTGCAGTTCACCCCTTAACTCGTTATGTTATGAACTATCTTAAATATGCATGTGAGTACAAAGATACCTTGGAGCAAGTATTCACACAAGGTCAAGGTGCCAACATTGAAGGGATTGAGATTCAAAATCACAAATCCATCCATGAGGAAGTGGAAGATGTAGGGATGCCCAAGAATTCACCTTTTGCACTTCAATTGATAACCATCATGGACCTTTTGGATGCAAACTTAGAAAGGAAATCAAAGTTGTACAGGGATCTTGCTTTGCACTATTTTTTTCTAATGAACAATAAGAGATACATAGTGCAAAAGGTCAAAGGGTGTGTAGAGCTTCATGAATTGATGGGTGACAATTGGTGTAGGAGGAGACAATCGGGGTTGAGGTTGTACCATAAGTGTTATCAAAGAGAAACTTGGAGTAAGATATTGCAGTGCCTTAAGCCAGAGGGTTTGCAGGGGACTAGGAACAAGGTGTCCAAACAACTTGTGAAGGAAAGGTTTAAGTGCTTCAATTCCATGTTTGAAGAGATACACAAAACTCAGTGTACTTGGATGGTGAGCGATGAGCAACTCCAGTCCGAACTCAGGGTTTCGATTTCAACTTTGGTGATCCCAGCATATCGCTCCTTTGTTGGAAGATTCAAACAACATTTAGAATCAACTAGACATATTGACAAGTATATCAAATATCATCCCGAGGACATTGAACTTTTAATTGATGATTTATTTGGTGGTAATGCTACGTCTATGACTAGAAGAAGAACATGA 1824 0.4002 MAMSSRNDDIGIREGEKEEVLQVVEDVDTFLRSGGDHVPDCVHVLPKLLERIVDKYNDGRKKLGEEPEDDKSFLNVVERIFKLSTCDTCDIALDQTSSVLEKAMSLLEKDLCSLLEEPKQKAPKKSFSFGSRSDLSLIPSKSPFLEQDQDNHDFPFNFSSQKISILNKITTTMITTGYQIECCMTFANFRRSAFTTALQRFGHRNMKMEDVYKMPWESLEGEIATWNQVVWHCTTVLFNAEQRLYDSIFPNQPSISQKLFGDLARYVIIRLLNFAQGAVLTKWSAEKLFKFLDMYETLREDIVGGSYLESCAKELAYETSTTKDMIIEAIVAMFCDLKTSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEQVFTQGQGANIEGIEIQNHKSIHEEVEDVGMPKNSPFALQLITIMDLLDANLERKSKLYRDLALHYFFLMNNKRYIVQKVKGCVELHELMGDNWCRRRQSGLRLYHKCYQRETWSKILQCLKPEGLQGTRNKVSKQLVKERFKCFNSMFEEIHKTQCTWMVSDEQLQSELRVSISTLVIPAYRSFVGRFKQHLESTRHIDKYIKYHPEDIELLIDDLFGGNATSMTRRRT* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2617 607 Pfam Exo70 exocyst complex subunit 226 592 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso10g2617 607 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 598 IPR004140 GO:0000145|GO:0006887
Gso10g2617 607 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 16 598 - -
Gso10g2617 607 Gene3D Exocyst complex component Exo70 54 605 - -
Gso10g2617 607 SUPERFAMILY Cullin repeat-like 64 595 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2617 Gso-Chr10 53097505 53099341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2617 19 606 EXO70 exocyst subunit family AT5G13150 47.869 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2617 K07195 - gmx:100784339 1231.08